Variant report

Variant rs12593371
Chromosome Location chr15:45640084-45640085
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:15 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45626000-45652000 Weak transcription Brain Substantia Nigra brain
2 chr15:45629800-45642000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr15:45634600-45651600 Weak transcription Brain Hippocampus Middle brain
4 chr15:45635200-45641400 Enhancers HepG2 liver
5 chr15:45635600-45641400 Enhancers Fetal Intestine Small intestine
6 chr15:45636600-45640800 Enhancers Liver Liver
7 chr15:45637200-45640200 Enhancers Cortex derived primary cultured neurospheres brain
8 chr15:45639000-45640400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr15:45639200-45664200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr15:45639400-45640400 Weak transcription Fetal Intestine Large intestine
11 chr15:45639400-45640400 Weak transcription Pancreas Pancrea
12 chr15:45639400-45640400 Weak transcription Stomach Mucosa stomach
13 chr15:45639600-45642000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr15:45639600-45661800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr15:45640000-45640600 Enhancers Rectal Mucosa Donor 31 rectum

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