Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10180435	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs10469593	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap]
rs1047874	0.95[CHB][hapmap]
rs11895946	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12612910	0.80[AMR][1000 genomes]
rs13021003	0.83[CEU][hapmap]
rs13387241	0.95[CHB][hapmap]
rs13413773	0.84[CEU][hapmap]
rs13416149	0.95[CHB][hapmap]
rs1386356	0.96[CEU][hapmap]
rs1486958	0.95[CHB][hapmap]
rs1486961	1.00[CHB][hapmap]
rs1486968	0.95[CHB][hapmap]
rs1492388	0.95[CHB][hapmap]
rs1492393	0.96[CEU][hapmap]
rs2029629	0.95[CHB][hapmap]
rs2046566	0.95[CHB][hapmap]
rs2839772	0.96[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6743080	0.95[CHB][hapmap]
rs7424028	0.83[CEU][hapmap]
rs7579083	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7581796	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834392	chr2:140920900-141086613	Flanking Active TSS Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv431757	chr2:140931289-141098020	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
3	esv2754491	chr2:140947477-141026986	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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