The 2.0 version of rSNPBase

Variant report

Variant rs12131515
Chromosome Location chr1:71524081-71524082
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:71513600-71533600 Weak transcription Lung lung
2 chr1:71514000-71525000 Weak transcription Rectal Smooth Muscle rectum
3 chr1:71514000-71527400 Weak transcription Colon Smooth Muscle Colon
4 chr1:71514000-71530600 Weak transcription Ovary ovary
5 chr1:71514000-71533600 Weak transcription Pancreas Pancrea
6 chr1:71514000-71533600 Weak transcription Right Ventricle heart
7 chr1:71514200-71524200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:71514200-71533600 Weak transcription Spleen Spleen
9 chr1:71514400-71524400 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:71515800-71524600 Weak transcription Fetal Brain Female brain
11 chr1:71515800-71524800 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr1:71515800-71525000 Weak transcription H1 Cell Line embryonic stem cell
13 chr1:71515800-71525200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr1:71515800-71526000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:71515800-71541000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:71516000-71524400 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr1:71517000-71526000 Weak transcription Thymus Thymus
18 chr1:71517600-71524400 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr1:71517600-71525000 Weak transcription NHDF-Ad bronchial
20 chr1:71518800-71524400 Weak transcription Brain Hippocampus Middle brain
21 chr1:71519000-71526200 Weak transcription Brain Substantia Nigra brain
22 chr1:71519000-71530200 Weak transcription Brain Cingulate Gyrus brain
23 chr1:71519200-71525000 Weak transcription HUVEC blood vessel
24 chr1:71519200-71525800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr1:71519200-71533400 Weak transcription Fetal Intestine Small intestine
26 chr1:71519400-71524400 Weak transcription Stomach Smooth Muscle stomach
27 chr1:71519400-71525600 Weak transcription Primary hematopoietic stem cells blood
28 chr1:71519400-71528200 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr1:71519600-71528000 Weak transcription Brain Germinal Matrix brain
30 chr1:71520000-71536800 Weak transcription Aorta Aorta
31 chr1:71520200-71524400 Weak transcription Fetal Muscle Leg muscle
32 chr1:71520200-71525200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:71520200-71525800 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:71520400-71524400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:71520400-71524600 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr1:71520400-71533600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:71520400-71534600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:71520600-71524800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:71520600-71526400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:71520600-71527200 Weak transcription Fetal Kidney kidney
41 chr1:71520600-71533600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:71520600-71544600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:71520800-71524400 Weak transcription Colonic Mucosa Colon
44 chr1:71520800-71527400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:71521000-71524400 Weak transcription HSMMtube muscle
46 chr1:71521000-71524600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr1:71521000-71525000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:71521000-71525200 Weak transcription Fetal Intestine Large intestine
49 chr1:71521000-71529800 Weak transcription Brain Angular Gyrus brain
50 chr1:71521200-71524400 Weak transcription NHEK skin

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Last update: Aug 31, 2015