Variant report
| Variant | rs12197551 |
|---|---|
| Chromosome Location | chr6:70282322-70282323 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:36)
| rs_ID | r2[population] |
|---|---|
| rs10455686 | 1.00[AMR][1000 genomes] |
| rs10455690 | 1.00[AMR][1000 genomes] |
| rs10455691 | 1.00[AMR][1000 genomes] |
| rs12190396 | 1.00[AMR][1000 genomes] |
| rs12190402 | 1.00[AMR][1000 genomes] |
| rs12190864 | 1.00[AMR][1000 genomes] |
| rs12191015 | 1.00[AMR][1000 genomes] |
| rs12191278 | 1.00[AMR][1000 genomes] |
| rs12195151 | 1.00[AMR][1000 genomes] |
| rs12199762 | 1.00[AMR][1000 genomes] |
| rs12201242 | 1.00[AMR][1000 genomes] |
| rs12201853 | 1.00[AMR][1000 genomes] |
| rs12202738 | 1.00[AMR][1000 genomes] |
| rs12202864 | 1.00[AMR][1000 genomes] |
| rs12203049 | 1.00[CEU][hapmap] |
| rs12206037 | 1.00[CEU][hapmap];0.88[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs12206435 | 1.00[AMR][1000 genomes] |
| rs12206486 | 1.00[AMR][1000 genomes] |
| rs12209670 | 1.00[AMR][1000 genomes] |
| rs12211815 | 1.00[AMR][1000 genomes] |
| rs12213515 | 1.00[AMR][1000 genomes] |
| rs12214229 | 1.00[AMR][1000 genomes] |
| rs12215588 | 1.00[AMR][1000 genomes] |
| rs12216085 | 1.00[AMR][1000 genomes] |
| rs12216407 | 1.00[AMR][1000 genomes] |
| rs6903829 | 1.00[AMR][1000 genomes] |
| rs6903838 | 1.00[AMR][1000 genomes] |
| rs6929485 | 1.00[AMR][1000 genomes] |
| rs7747174 | 1.00[AMR][1000 genomes] |
| rs7747318 | 0.87[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7766134 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7766977 | 1.00[AMR][1000 genomes] |
| rs7767301 | 1.00[CEU][hapmap];0.88[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs7770631 | 1.00[AMR][1000 genomes] |
| rs9346302 | 1.00[AMR][1000 genomes] |
| rs9454810 | 1.00[AMR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:70282200-70282400 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
