Variant report

Variant	rs12211815
Chromosome Location	chr6:70330673-70330674
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10455686	1.00[AMR][1000 genomes]
rs10455690	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10455691	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10455698	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10455699	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10455700	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12190396	1.00[AMR][1000 genomes]
rs12190402	1.00[AMR][1000 genomes]
rs12190864	1.00[AMR][1000 genomes]
rs12191015	1.00[AMR][1000 genomes]
rs12191278	1.00[AMR][1000 genomes]
rs12195151	1.00[AMR][1000 genomes]
rs12197551	1.00[AMR][1000 genomes]
rs12199762	1.00[AMR][1000 genomes]
rs12201242	1.00[AMR][1000 genomes]
rs12201853	1.00[AMR][1000 genomes]
rs12202643	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12202738	1.00[AMR][1000 genomes]
rs12202864	1.00[AMR][1000 genomes]
rs12203049	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12206037	1.00[AMR][1000 genomes]
rs12206435	1.00[AMR][1000 genomes]
rs12206486	1.00[AMR][1000 genomes]
rs12208129	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12209670	1.00[AMR][1000 genomes]
rs12210125	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12210683	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12213515	1.00[AMR][1000 genomes]
rs12214229	1.00[AMR][1000 genomes]
rs12216085	1.00[AMR][1000 genomes]
rs12216407	1.00[AMR][1000 genomes]
rs60614865	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6903829	1.00[AMR][1000 genomes]
rs6903838	1.00[AMR][1000 genomes]
rs6929485	1.00[AMR][1000 genomes]
rs7741429	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7747174	1.00[AMR][1000 genomes]
rs7747318	1.00[AMR][1000 genomes]
rs7766134	1.00[AMR][1000 genomes]
rs7766977	1.00[AMR][1000 genomes]
rs7767301	1.00[AMR][1000 genomes]
rs7770631	1.00[AMR][1000 genomes]
rs9346302	1.00[AMR][1000 genomes]
rs9454810	1.00[AMR][1000 genomes]
rs9454847	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9454848	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022847	chr6:70300521-70337899	Enhancers Bivalent Enhancer Weak transcription Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70329400-70341400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr6:70330200-70331000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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