Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:114009414..114019168-chr6:114176401..114180605,12	MCF-7	breast:

Variant related genes	Relation type
ENSG00000155130	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11153430	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11153431	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12190203	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12191218	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12191966	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12200427	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12200934	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12203628	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12209179	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12213207	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62415964	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62415965	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62415966	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62415969	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62415970	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62415974	0.83[EUR][1000 genomes]
rs7761143	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7767752	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9384880	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9387166	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9400659	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114006000-114011000	Weak transcription	HSMM	muscle
2	chr6:114006000-114014800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr6:114006000-114015600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr6:114006600-114011200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:114006600-114011400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr6:114006600-114011600	Weak transcription	HMEC	breast
7	chr6:114006600-114011600	Weak transcription	NHEK	skin
8	chr6:114008400-114015200	Weak transcription	HepG2	liver
9	chr6:114009600-114011800	Enhancers	Stomach Mucosa	stomach
10	chr6:114010000-114011000	Weak transcription	NH-A	brain

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