Variant report

Variant	rs9387166
Chromosome Location	chr6:114004214-114004215
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1080429	1.00[ASN][1000 genomes]
rs11153430	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11153431	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12190203	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12191218	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12191966	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12200427	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12200934	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12200957	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12203628	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12204123	0.83[AMR][1000 genomes]
rs12209179	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12213207	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17075401	1.00[ASN][1000 genomes]
rs1899787	1.00[ASN][1000 genomes]
rs2588020	1.00[ASN][1000 genomes]
rs2588022	1.00[ASN][1000 genomes]
rs2588024	1.00[ASN][1000 genomes]
rs2588027	1.00[ASN][1000 genomes]
rs2588029	1.00[ASN][1000 genomes]
rs2695455	1.00[ASN][1000 genomes]
rs2695459	1.00[ASN][1000 genomes]
rs4615422	1.00[ASN][1000 genomes]
rs58433452	1.00[ASN][1000 genomes]
rs59483308	1.00[ASN][1000 genomes]
rs60437986	1.00[ASN][1000 genomes]
rs62415964	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62415965	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62415966	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62415969	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62415970	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62415974	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62416008	1.00[ASN][1000 genomes]
rs7741192	1.00[ASN][1000 genomes]
rs7761143	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7767752	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9384880	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400659	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9488242	1.00[ASN][1000 genomes]
rs9488243	1.00[ASN][1000 genomes]
rs9488246	1.00[ASN][1000 genomes]
rs9968962	1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113996400-114004600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr6:113997400-114005600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr6:113999000-114007000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr6:114002600-114004400	Weak transcription	HepG2	liver
5	chr6:114003000-114005600	Weak transcription	Primary B cells from peripheral blood	blood
6	chr6:114004000-114005200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:114004000-114005400	Weak transcription	Stomach Mucosa	stomach
8	chr6:114004200-114004800	Enhancers	Primary hematopoietic stem cells	blood
9	chr6:114004200-114005000	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr6:114004200-114006200	Enhancers	HUES6 Cell Line	embryonic stem cell

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