The 2.0 version of rSNPBase

Variant report

Variant rs12232110
Chromosome Location chr14:39887331-39887332
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:39863400-39891600 Weak transcription Small Intestine intestine
2 chr14:39864600-39898800 Weak transcription Rectal Smooth Muscle rectum
3 chr14:39865000-39891200 Weak transcription Psoas Muscle Psoas
4 chr14:39865000-39898200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr14:39869000-39895600 Weak transcription Hela-S3 cervix
6 chr14:39882200-39895400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr14:39885000-39887800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
8 chr14:39885200-39891400 Weak transcription Gastric stomach
9 chr14:39886000-39890800 Weak transcription Fetal Brain Male brain
10 chr14:39886000-39895600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr14:39886200-39887600 ZNF genes & repeats Fetal Stomach stomach
12 chr14:39886200-39890600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr14:39886200-39895600 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr14:39886400-39888200 Weak transcription Fetal Heart heart
15 chr14:39886400-39888400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr14:39886400-39888600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr14:39886400-39888600 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr14:39886400-39892600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr14:39886400-39895600 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr14:39886600-39888400 Weak transcription Liver Liver
21 chr14:39886600-39888800 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr14:39886600-39889000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr14:39886600-39889600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr14:39886600-39889600 Weak transcription Left Ventricle heart
25 chr14:39886600-39890200 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr14:39886600-39890200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr14:39886600-39890200 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr14:39886600-39890800 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr14:39886600-39890800 Weak transcription Brain Angular Gyrus brain
30 chr14:39886600-39891200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr14:39886600-39891200 Weak transcription Lung lung
32 chr14:39886600-39891200 Weak transcription Ovary ovary
33 chr14:39886600-39891200 Weak transcription Right Ventricle heart
34 chr14:39886600-39891400 Weak transcription Aorta Aorta
35 chr14:39886600-39891800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr14:39886600-39894000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr14:39886600-39894400 Weak transcription Muscle Satellite Cultured Cells --
38 chr14:39886600-39895600 Weak transcription Fetal Lung lung
39 chr14:39886600-39895800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr14:39886600-39895800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr14:39886600-39898000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr14:39886600-39900000 Weak transcription Esophagus oesophagus
43 chr14:39886600-39900000 Weak transcription Pancreas Pancrea
44 chr14:39886800-39888200 Weak transcription Primary B cells from cord blood blood
45 chr14:39886800-39889800 Weak transcription Primary T cells fromperipheralblood blood
46 chr14:39886800-39890200 Weak transcription Primary T cells from cord blood blood
47 chr14:39886800-39890200 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr14:39886800-39891200 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr14:39886800-39892600 Weak transcription Duodenum Mucosa Duodenum
50 chr14:39886800-39895600 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015