The 2.0 version of rSNPBase

Variant report

Variant rs12588175
Chromosome Location chr14:39894085-39894086
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:39864600-39898800 Weak transcription Rectal Smooth Muscle rectum
2 chr14:39865000-39898200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr14:39869000-39895600 Weak transcription Hela-S3 cervix
4 chr14:39882200-39895400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr14:39886000-39895600 Weak transcription Brain Inferior Temporal Lobe brain
6 chr14:39886200-39895600 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr14:39886400-39895600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr14:39886600-39894400 Weak transcription Muscle Satellite Cultured Cells --
9 chr14:39886600-39895600 Weak transcription Fetal Lung lung
10 chr14:39886600-39895800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr14:39886600-39895800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr14:39886600-39898000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr14:39886600-39900000 Weak transcription Esophagus oesophagus
14 chr14:39886600-39900000 Weak transcription Pancreas Pancrea
15 chr14:39886800-39895600 Weak transcription Primary B cells from peripheral blood blood
16 chr14:39886800-39895600 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr14:39886800-39895600 Weak transcription HepG2 liver
18 chr14:39886800-39895800 Weak transcription Brain Anterior Caudate brain
19 chr14:39886800-39895800 Weak transcription Fetal Thymus thymus
20 chr14:39886800-39895800 Weak transcription Thymus Thymus
21 chr14:39886800-39899200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr14:39886800-39899600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr14:39887000-39895800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr14:39887000-39899200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr14:39887200-39895400 Weak transcription Dnd41 blood
26 chr14:39887200-39895600 Weak transcription GM12878-XiMat blood
27 chr14:39887600-39898000 Weak transcription Fetal Stomach stomach
28 chr14:39889400-39895600 Weak transcription Liver Liver
29 chr14:39889600-39898800 Weak transcription Stomach Smooth Muscle stomach
30 chr14:39889800-39895400 Weak transcription Primary monocytes fromperipheralblood blood
31 chr14:39889800-39898800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr14:39890200-39895600 Weak transcription Primary hematopoietic stem cells blood
33 chr14:39890200-39895600 Enhancers Primary T helper cells PMA-I stimulated --
34 chr14:39890200-39896800 Enhancers Primary T killer naive cells fromperipheralblood blood
35 chr14:39890400-39895800 Weak transcription Primary T cells fromperipheralblood blood
36 chr14:39890600-39897800 Enhancers Primary T helper cells fromperipheralblood blood
37 chr14:39890600-39897800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr14:39890600-39897800 Weak transcription Fetal Brain Female brain
39 chr14:39890800-39895400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr14:39890800-39895600 Weak transcription Primary T cells from cord blood blood
41 chr14:39890800-39895600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr14:39890800-39895800 Weak transcription Primary B cells from cord blood blood
43 chr14:39890800-39895800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr14:39890800-39896400 Enhancers Fetal Heart heart
45 chr14:39891000-39895400 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr14:39891000-39898400 Weak transcription Fetal Kidney kidney
47 chr14:39891200-39895800 Weak transcription Fetal Muscle Leg muscle
48 chr14:39891200-39897600 Weak transcription Fetal Brain Male brain
49 chr14:39891200-39898800 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr14:39891400-39897000 Weak transcription Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015