Variant report

Variant rs12245592
Chromosome Location chr10:18294515-18294516
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:18293600-18295600 Weak transcription Brain Anterior Caudate brain
2 chr10:18293800-18294800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
3 chr10:18293800-18295400 Enhancers H1 Cell Line embryonic stem cell
4 chr10:18293800-18295400 Enhancers HUES6 Cell Line embryonic stem cell
5 chr10:18294000-18295600 Enhancers iPS-18 Cell Line embryonic stem cell
6 chr10:18294200-18294600 Flanking Active TSS NHDF-Ad bronchial
7 chr10:18294200-18294800 Enhancers Adipose Nuclei Adipose
8 chr10:18294200-18294800 Flanking Active TSS NH-A brain
9 chr10:18294200-18295000 Flanking Active TSS Osteobl bone
10 chr10:18294200-18295200 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr10:18294200-18295200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr10:18294200-18295200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr10:18294200-18295200 Flanking Active TSS Hela-S3 cervix
14 chr10:18294200-18295400 Enhancers Muscle Satellite Cultured Cells --
15 chr10:18294200-18295400 Enhancers HUVEC blood vessel
16 chr10:18294200-18295600 Enhancers HUES48 Cell Line embryonic stem cell
17 chr10:18294200-18295600 Enhancers HUES64 Cell Line embryonic stem cell
18 chr10:18294200-18295600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr10:18294200-18295600 Enhancers Fetal Stomach stomach
20 chr10:18294200-18295600 Enhancers NHLF lung
21 chr10:18294200-18296000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr10:18294400-18294600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
23 chr10:18294400-18294600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
24 chr10:18294400-18294600 Flanking Active TSS Pancreatic Islets Pancreatic Islet
25 chr10:18294400-18294600 Flanking Active TSS Fetal Lung lung
26 chr10:18294400-18294600 Active TSS Rectal Mucosa Donor 29 rectum
27 chr10:18294400-18294600 Enhancers Rectal Mucosa Donor 31 rectum
28 chr10:18294400-18294600 Enhancers Rectal Smooth Muscle rectum
29 chr10:18294400-18294800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr10:18294400-18294800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
31 chr10:18294400-18294800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr10:18294400-18294800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
33 chr10:18294400-18294800 Enhancers Fetal Muscle Leg muscle
34 chr10:18294400-18294800 Active TSS Ovary ovary
35 chr10:18294400-18295000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr10:18294400-18295000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr10:18294400-18295000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
38 chr10:18294400-18295000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
39 chr10:18294400-18295000 Enhancers Brain Substantia Nigra brain
40 chr10:18294400-18295000 Active TSS Stomach Smooth Muscle stomach
41 chr10:18294400-18295200 Enhancers Fetal Kidney kidney
42 chr10:18294400-18295400 Enhancers Brain Germinal Matrix brain
43 chr10:18294400-18295600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr10:18294400-18295600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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