Variant report

Variant	rs74118077
Chromosome Location	chr10:18292788-18292789
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11011692	1.00[EUR][1000 genomes]
rs12245592	1.00[EUR][1000 genomes]
rs12262999	1.00[EUR][1000 genomes]
rs1443498	1.00[EUR][1000 genomes]
rs28684480	1.00[EUR][1000 genomes]
rs4595442	1.00[EUR][1000 genomes]
rs7085495	1.00[EUR][1000 genomes]
rs7085502	1.00[EUR][1000 genomes]
rs74118062	1.00[EUR][1000 genomes]
rs74118065	1.00[EUR][1000 genomes]
rs74118066	1.00[EUR][1000 genomes]
rs74118067	1.00[EUR][1000 genomes]
rs74118068	1.00[EUR][1000 genomes]
rs74118071	1.00[EUR][1000 genomes]
rs74118072	1.00[EUR][1000 genomes]
rs74118073	1.00[EUR][1000 genomes]
rs74118075	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3415320	chr10:18122232-18333356	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv1039655	chr10:18252931-18348954	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18290000-18294200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr10:18290200-18294200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr10:18291600-18294200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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