Variant report

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11011692	1.00[EUR][1000 genomes]
rs12245592	1.00[EUR][1000 genomes]
rs12262999	1.00[EUR][1000 genomes]
rs1443498	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28684480	1.00[EUR][1000 genomes]
rs4595442	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7085495	1.00[EUR][1000 genomes]
rs7085502	1.00[EUR][1000 genomes]
rs74118058	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74118062	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74118063	0.81[AFR][1000 genomes]
rs74118065	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74118066	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74118067	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74118068	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74118071	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74118072	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74118075	1.00[EUR][1000 genomes]
rs74118077	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755188	chr10:17881747-18292594	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	9 gene(s)	inside rSNPs	diseases
2	esv3415320	chr10:18122232-18333356	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	nsv1039655	chr10:18252931-18348954	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18266800-18276400	Weak transcription	Brain Substantia Nigra	brain
2	chr10:18272200-18273600	Enhancers	Hela-S3	cervix
3	chr10:18272400-18274000	Enhancers	GM12878-XiMat	blood
4	chr10:18272800-18273400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr10:18272800-18273400	Enhancers	HSMM	muscle
6	chr10:18272800-18273400	Enhancers	NHDF-Ad	bronchial
7	chr10:18272800-18273400	Enhancers	NHLF	lung
8	chr10:18272800-18273600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr10:18272800-18273600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr10:18272800-18273600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr10:18272800-18273600	Enhancers	Muscle Satellite Cultured Cells	--
12	chr10:18272800-18273600	Enhancers	NHEK	skin
13	chr10:18272800-18273600	Enhancers	Osteobl	bone
14	chr10:18272800-18273800	Enhancers	NH-A	brain
15	chr10:18273000-18273200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr10:18273000-18273400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr10:18273000-18273400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr10:18273000-18273400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr10:18273000-18273600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr10:18273000-18274000	Enhancers	Monocytes-CD14+_RO01746	blood

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