Variant report
| Variant | rs12250507 |
|---|---|
| Chromosome Location | chr10:89503969-89503970 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:89460400-89512000 | Weak transcription | HSMM | muscle |
| 2 | chr10:89463000-89541400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr10:89473000-89577200 | Weak transcription | Gastric | stomach |
| 4 | chr10:89476200-89542400 | Weak transcription | Pancreas | Pancrea |
| 5 | chr10:89476400-89504800 | Weak transcription | Left Ventricle | heart |
| 6 | chr10:89490800-89511400 | Weak transcription | Primary B cells from cord blood | blood |
| 7 | chr10:89495000-89512200 | Weak transcription | Colon Smooth Muscle | Colon |
| 8 | chr10:89495000-89514000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 9 | chr10:89495000-89541400 | Weak transcription | Right Ventricle | heart |
| 10 | chr10:89495000-89576400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr10:89495200-89504200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 12 | chr10:89495200-89504600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 13 | chr10:89495200-89505000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 14 | chr10:89495200-89509000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 15 | chr10:89495200-89509000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 16 | chr10:89495200-89509600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 17 | chr10:89495200-89511800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 18 | chr10:89495200-89514000 | Weak transcription | Fetal Muscle Leg | muscle |
| 19 | chr10:89495200-89515600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 20 | chr10:89495200-89530600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 21 | chr10:89495200-89542600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 22 | chr10:89495200-89544600 | Weak transcription | Brain Substantia Nigra | brain |
| 23 | chr10:89495200-89559200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 24 | chr10:89495200-89577400 | Weak transcription | Spleen | Spleen |
| 25 | chr10:89495400-89525600 | Weak transcription | Brain Hippocampus Middle | brain |
| 26 | chr10:89495600-89513000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 27 | chr10:89498200-89519400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 28 | chr10:89498200-89541400 | Weak transcription | Aorta | Aorta |
| 29 | chr10:89498800-89536200 | Weak transcription | Small Intestine | intestine |
| 30 | chr10:89499800-89511200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr10:89500000-89504000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 32 | chr10:89500600-89505200 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 33 | chr10:89500600-89511800 | Weak transcription | HMEC | breast |
| 34 | chr10:89500600-89513000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 35 | chr10:89500800-89504200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 36 | chr10:89500800-89505000 | Weak transcription | A549 | lung |
| 37 | chr10:89501000-89504200 | Weak transcription | NHDF-Ad | bronchial |
| 38 | chr10:89501000-89506200 | Strong transcription | Fetal Intestine Small | intestine |
| 39 | chr10:89501000-89507000 | Strong transcription | Osteobl | bone |
| 40 | chr10:89501000-89509600 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 41 | chr10:89501000-89511600 | Weak transcription | Hela-S3 | cervix |
| 42 | chr10:89501400-89508800 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 43 | chr10:89501600-89507000 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 44 | chr10:89502000-89508600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 45 | chr10:89502200-89505600 | Strong transcription | Fetal Lung | lung |
| 46 | chr10:89502200-89507000 | Strong transcription | NHLF | lung |
| 47 | chr10:89502400-89506800 | Strong transcription | Ovary | ovary |
| 48 | chr10:89502400-89507400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 49 | chr10:89502600-89505600 | Strong transcription | Fetal Intestine Large | intestine |
| 50 | chr10:89502600-89506800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
