The 2.0 version of rSNPBase

Variant report

Variant rs74149609
Chromosome Location chr10:89514066-89514067
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89463000-89541400 Weak transcription Rectal Smooth Muscle rectum
2 chr10:89473000-89577200 Weak transcription Gastric stomach
3 chr10:89476200-89542400 Weak transcription Pancreas Pancrea
4 chr10:89495000-89541400 Weak transcription Right Ventricle heart
5 chr10:89495000-89576400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr10:89495200-89515600 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr10:89495200-89530600 Weak transcription Brain Cingulate Gyrus brain
8 chr10:89495200-89542600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr10:89495200-89544600 Weak transcription Brain Substantia Nigra brain
10 chr10:89495200-89559200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr10:89495200-89577400 Weak transcription Spleen Spleen
12 chr10:89495400-89525600 Weak transcription Brain Hippocampus Middle brain
13 chr10:89498200-89519400 Weak transcription Stomach Smooth Muscle stomach
14 chr10:89498200-89541400 Weak transcription Aorta Aorta
15 chr10:89498800-89536200 Weak transcription Small Intestine intestine
16 chr10:89503200-89521200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr10:89503400-89523200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr10:89503400-89528400 Weak transcription Fetal Muscle Trunk muscle
19 chr10:89503600-89515600 Weak transcription HepG2 liver
20 chr10:89504200-89551800 Weak transcription Psoas Muscle Psoas
21 chr10:89505000-89520000 Weak transcription Fetal Stomach stomach
22 chr10:89506800-89520000 Weak transcription Fetal Intestine Small intestine
23 chr10:89507000-89515400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr10:89507000-89517600 Weak transcription Brain Angular Gyrus brain
25 chr10:89507000-89525600 Weak transcription Brain Inferior Temporal Lobe brain
26 chr10:89507000-89557600 Weak transcription Lung lung
27 chr10:89509000-89527000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr10:89510000-89515400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr10:89510000-89515800 Weak transcription K562 blood
30 chr10:89510200-89553800 Weak transcription Esophagus oesophagus
31 chr10:89510400-89515600 Weak transcription Brain Germinal Matrix brain
32 chr10:89510400-89525800 Weak transcription H1 Cell Line embryonic stem cell
33 chr10:89510600-89515800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr10:89510600-89515800 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr10:89510800-89514200 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr10:89510800-89519800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr10:89510800-89523000 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr10:89511000-89514200 Weak transcription Liver Liver
39 chr10:89511000-89519800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr10:89511000-89576800 Weak transcription Colonic Mucosa Colon
41 chr10:89511200-89515600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr10:89511200-89521400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr10:89511200-89526800 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr10:89511400-89518000 Strong transcription Primary B cells from cord blood blood
45 chr10:89511400-89521200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr10:89511600-89516400 Strong transcription Primary T helper cells PMA-I stimulated --
47 chr10:89511600-89516800 Strong transcription Hela-S3 cervix
48 chr10:89511600-89517600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr10:89511600-89525600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr10:89511800-89516400 Strong transcription A549 lung

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Last update: Aug 31, 2015