The 2.0 version of rSNPBase

Variant report

Variant rs12286551
Chromosome Location chr11:102183529-102183530
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102173600-102183800 Weak transcription Lung lung
2 chr11:102176800-102187800 Weak transcription Pancreas Pancrea
3 chr11:102177000-102187800 Weak transcription Spleen Spleen
4 chr11:102177200-102187000 Weak transcription Colonic Mucosa Colon
5 chr11:102177600-102183800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:102178000-102184000 Weak transcription Placenta Amnion Placenta Amnion
7 chr11:102178200-102183600 Weak transcription NH-A brain
8 chr11:102178200-102183800 Weak transcription Fetal Intestine Large intestine
9 chr11:102178200-102183800 Weak transcription Left Ventricle heart
10 chr11:102178200-102183800 Weak transcription Psoas Muscle Psoas
11 chr11:102178200-102188000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr11:102178400-102183600 Weak transcription Placenta Placenta
13 chr11:102178400-102183800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr11:102178400-102183800 Weak transcription Stomach Mucosa stomach
15 chr11:102178400-102187200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr11:102178400-102187800 Weak transcription H9 Cell Line embryonic stem cell
17 chr11:102178600-102183800 Weak transcription Primary monocytes fromperipheralblood blood
18 chr11:102181800-102183600 Enhancers Primary T helper cells PMA-I stimulated --
19 chr11:102181800-102187200 Enhancers Primary B cells from peripheral blood blood
20 chr11:102181800-102187200 Enhancers Primary T helper cells fromperipheralblood blood
21 chr11:102182000-102185600 Enhancers Small Intestine intestine
22 chr11:102182000-102187200 Enhancers Primary B cells from cord blood blood
23 chr11:102182400-102183800 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr11:102182400-102183800 Enhancers Rectal Smooth Muscle rectum
25 chr11:102182800-102184000 Enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr11:102182800-102184000 Enhancers Rectal Mucosa Donor 31 rectum
27 chr11:102183000-102183800 Enhancers Hela-S3 cervix
28 chr11:102183000-102184600 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr11:102183000-102185000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
30 chr11:102183200-102183600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
31 chr11:102183200-102183800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr11:102183200-102184000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr11:102183200-102184000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr11:102183200-102184000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr11:102183200-102184200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr11:102183200-102184400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
37 chr11:102183200-102184400 Flanking Active TSS Dnd41 blood
38 chr11:102183200-102184800 Enhancers Sigmoid Colon Sigmoid Colon
39 chr11:102183200-102185400 Enhancers Fetal Thymus thymus
40 chr11:102183400-102183600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr11:102183400-102183600 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr11:102183400-102183600 Flanking Active TSS Brain Angular Gyrus brain
43 chr11:102183400-102183600 Flanking Active TSS Fetal Lung lung
44 chr11:102183400-102183600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
45 chr11:102183400-102183600 Flanking Active TSS NHEK skin
46 chr11:102183400-102183800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
47 chr11:102183400-102183800 Active TSS Primary T cells fromperipheralblood blood
48 chr11:102183400-102183800 Flanking Active TSS Primary hematopoietic stem cells blood
49 chr11:102183400-102183800 Enhancers Primary T helper naive cells from peripheral blood blood
50 chr11:102183400-102183800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015