Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32426521..32428841-chr11:32446378..32448492,2	K562	blood:
2	chr11:32426055..32429120-chr11:32454398..32457565,3	K562	blood:

Variant related genes	Relation type
ENSG00000183242	Chromatin interaction
ENSG00000184937	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10835898	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11031703	1.00[AMR][1000 genomes]
rs11031825	1.00[AMR][1000 genomes]
rs11824202	1.00[AMR][1000 genomes]
rs11825204	1.00[AMR][1000 genomes]
rs12270264	1.00[AMR][1000 genomes]
rs12276632	1.00[AMR][1000 genomes]
rs12283279	1.00[AMR][1000 genomes]
rs12287273	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12288162	1.00[AMR][1000 genomes]
rs12292313	1.00[AMR][1000 genomes]
rs12292455	1.00[AMR][1000 genomes]
rs12293175	1.00[AMR][1000 genomes]
rs12293280	1.00[AMR][1000 genomes]
rs12294446	1.00[AMR][1000 genomes]
rs12294449	1.00[AMR][1000 genomes]
rs41490947	1.00[AMR][1000 genomes]
rs5030285	0.87[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7107141	1.00[AMR][1000 genomes]
rs7936995	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv1038188	chr11:32410305-32449799	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32420400-32429600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:32422200-32433400	Weak transcription	Ovary	ovary
3	chr11:32424200-32433400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr11:32426400-32434400	Weak transcription	Fetal Kidney	kidney
5	chr11:32427600-32428800	Weak transcription	Dnd41	blood
6	chr11:32427800-32435000	Weak transcription	K562	blood

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