The 2.0 version of rSNPBase

Variant report

Variant rs12290367
Chromosome Location chr11:73181623-73181624
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:73123800-73209600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr11:73131000-73190000 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr11:73141800-73183000 Weak transcription Stomach Smooth Muscle stomach
4 chr11:73141800-73231600 Weak transcription Thymus Thymus
5 chr11:73148000-73182000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr11:73151000-73187000 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr11:73156000-73187800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr11:73163800-73225600 Weak transcription Fetal Stomach stomach
9 chr11:73165200-73186600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr11:73168600-73189800 Weak transcription Hela-S3 cervix
11 chr11:73170400-73185800 Weak transcription HepG2 liver
12 chr11:73172800-73218800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr11:73173800-73184400 Weak transcription Spleen Spleen
14 chr11:73174200-73186800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr11:73174600-73187800 Weak transcription Primary T cells from cord blood blood
16 chr11:73176400-73186600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr11:73177000-73189800 Weak transcription Fetal Heart heart
18 chr11:73177400-73189800 Weak transcription HMEC breast
19 chr11:73177400-73190000 Weak transcription Osteobl bone
20 chr11:73177400-73191400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr11:73177400-73191800 Weak transcription NHDF-Ad bronchial
22 chr11:73177600-73186800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr11:73178000-73184600 Weak transcription Fetal Thymus thymus
24 chr11:73178400-73181800 Enhancers Left Ventricle heart
25 chr11:73178400-73182200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
26 chr11:73178400-73182200 Enhancers Psoas Muscle Psoas
27 chr11:73178600-73190000 Weak transcription Fetal Brain Male brain
28 chr11:73178800-73186600 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr11:73179200-73181800 Enhancers Right Atrium heart
30 chr11:73179200-73183000 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr11:73179600-73183800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr11:73179600-73192400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr11:73179800-73181800 Enhancers Primary hematopoietic stem cells blood
34 chr11:73180000-73188000 Weak transcription Primary B cells from cord blood blood
35 chr11:73180000-73191800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr11:73180200-73186600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr11:73180600-73181800 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr11:73180600-73186800 Weak transcription Brain Substantia Nigra brain
39 chr11:73180600-73189600 Weak transcription Brain Cingulate Gyrus brain
40 chr11:73180800-73182000 Enhancers Skeletal Muscle Female skeletal muscle
41 chr11:73180800-73182200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr11:73180800-73186800 Weak transcription Right Ventricle heart
43 chr11:73181200-73181800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
44 chr11:73181200-73182200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr11:73181400-73182000 Strong transcription Dnd41 blood
46 chr11:73181400-73182200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr11:73181600-73182600 Weak transcription Brain Hippocampus Middle brain
48 chr11:73181600-73182600 Weak transcription GM12878-XiMat blood
49 chr11:73181600-73182800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr11:73181600-73188000 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015