Variant report

Variant rs12332586
Chromosome Location chr5:115882940-115882941
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115871000-115890400 Weak transcription Pancreas Pancrea
2 chr5:115873200-115883600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:115873200-115889800 Weak transcription Rectal Smooth Muscle rectum
4 chr5:115876400-115886200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr5:115877800-115883800 Weak transcription H9 Cell Line embryonic stem cell
6 chr5:115878200-115893200 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr5:115879400-115883000 Weak transcription Brain Anterior Caudate brain
8 chr5:115880000-115883600 Weak transcription Small Intestine intestine
9 chr5:115880000-115890400 Weak transcription Colonic Mucosa Colon
10 chr5:115880800-115884000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr5:115880800-115900600 Weak transcription Fetal Kidney kidney
12 chr5:115881000-115886200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr5:115881000-115888200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr5:115881000-115889000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr5:115881600-115883000 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:115881600-115884200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr5:115881600-115886200 Weak transcription Placenta Placenta
18 chr5:115881600-115888400 Enhancers Fetal Intestine Large intestine
19 chr5:115881800-115889000 Enhancers Brain Hippocampus Middle brain
20 chr5:115882000-115885200 Enhancers Brain Substantia Nigra brain
21 chr5:115882000-115885200 Enhancers Fetal Intestine Small intestine
22 chr5:115882200-115886400 Genic enhancers HUES6 Cell Line embryonic stem cell
23 chr5:115882200-115890200 Weak transcription Fetal Stomach stomach
24 chr5:115882400-115883400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr5:115882400-115883600 Weak transcription Brain Inferior Temporal Lobe brain
26 chr5:115882400-115883800 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr5:115882400-115884000 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr5:115882400-115885400 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr5:115882400-115886600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr5:115882400-115888600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr5:115882600-115883200 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr5:115882600-115883600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr5:115882600-115883600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr5:115882600-115883600 Weak transcription Brain Cingulate Gyrus brain
35 chr5:115882600-115883600 Weak transcription Duodenum Mucosa Duodenum
36 chr5:115882600-115883600 Active TSS Rectal Mucosa Donor 29 rectum
37 chr5:115882600-115884400 Enhancers Rectal Mucosa Donor 31 rectum
38 chr5:115882600-115885400 Strong transcription HUES64 Cell Line embryonic stem cell
39 chr5:115882600-115885400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr5:115882600-115885800 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr5:115882600-115886200 Weak transcription Psoas Muscle Psoas
42 chr5:115882600-115888200 Weak transcription Fetal Muscle Leg muscle
43 chr5:115882600-115890400 Weak transcription HepG2 liver
44 chr5:115882600-115890800 Weak transcription Aorta Aorta
45 chr5:115882600-115895400 Weak transcription Fetal Muscle Trunk muscle
46 chr5:115882800-115883800 Weak transcription H1 Cell Line embryonic stem cell
47 chr5:115882800-115887200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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