Variant report

Variant rs12359980
Chromosome Location chr10:43976983-43976984
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43952000-43977200 Weak transcription HSMMtube muscle
2 chr10:43957800-43977200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr10:43967400-43978600 Weak transcription Pancreas Pancrea
4 chr10:43968800-43977200 Weak transcription Brain Hippocampus Middle brain
5 chr10:43969000-43977000 Weak transcription Brain Anterior Caudate brain
6 chr10:43969400-43977200 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr10:43969600-43977200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr10:43969800-43978200 Weak transcription Fetal Kidney kidney
9 chr10:43974800-43977200 Weak transcription Gastric stomach
10 chr10:43974800-43982600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr10:43975000-43977200 Weak transcription Brain Cingulate Gyrus brain
12 chr10:43975200-43977200 Weak transcription Primary B cells from cord blood blood
13 chr10:43975400-43977000 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr10:43976000-43977200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr10:43976000-43979200 ZNF genes & repeats Liver Liver
16 chr10:43976200-43977200 Weak transcription Brain Angular Gyrus brain
17 chr10:43976200-43978600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr10:43976200-43978600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr10:43976200-43978600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
20 chr10:43976200-43978800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
21 chr10:43976400-43977200 ZNF genes & repeats Primary T cells from cord blood blood
22 chr10:43976400-43977200 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr10:43976400-43977400 ZNF genes & repeats Thymus Thymus
24 chr10:43976400-43977600 ZNF genes & repeats Aorta Aorta
25 chr10:43976400-43978000 ZNF genes & repeats Colon Smooth Muscle Colon
26 chr10:43976400-43978200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr10:43976400-43978400 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr10:43976400-43978400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
29 chr10:43976400-43978400 ZNF genes & repeats Adipose Nuclei Adipose
30 chr10:43976400-43978600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
31 chr10:43976400-43978600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
32 chr10:43976400-43978600 ZNF genes & repeats Ovary ovary
33 chr10:43976400-43978800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
34 chr10:43976600-43978200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
35 chr10:43976600-43978600 ZNF genes & repeats Duodenum Mucosa Duodenum
36 chr10:43976800-43977600 ZNF genes & repeats Fetal Muscle Leg muscle
37 chr10:43976800-43977800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr10:43976800-43978000 ZNF genes & repeats Primary B cells from peripheral blood blood
39 chr10:43976800-43978000 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
40 chr10:43976800-43978200 ZNF genes & repeats Stomach Smooth Muscle stomach

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