The 2.0 version of rSNPBase

Variant report

Variant rs12533560
Chromosome Location chr7:124561882-124561883
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:124462200-124568200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr7:124466400-124562200 Weak transcription Muscle Satellite Cultured Cells --
3 chr7:124466600-124563400 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr7:124498200-124568800 Weak transcription Brain Anterior Caudate brain
5 chr7:124522800-124568400 Weak transcription Brain Cingulate Gyrus brain
6 chr7:124527600-124562200 Weak transcription A549 lung
7 chr7:124527600-124569000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr7:124527600-124569000 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr7:124528000-124567400 Weak transcription HepG2 liver
10 chr7:124529800-124564400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr7:124530000-124569000 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr7:124532000-124569000 Weak transcription Duodenum Mucosa Duodenum
13 chr7:124532600-124562600 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr7:124532600-124568400 Weak transcription NHDF-Ad bronchial
15 chr7:124532600-124568800 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr7:124532600-124569000 Weak transcription HSMM muscle
17 chr7:124532800-124568400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr7:124532800-124569000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr7:124533200-124562800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr7:124535800-124563000 Weak transcription Primary T cells from cord blood blood
21 chr7:124537800-124566000 Weak transcription Primary T cells fromperipheralblood blood
22 chr7:124538000-124569200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr7:124541000-124568600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr7:124541000-124569000 Weak transcription Fetal Muscle Leg muscle
25 chr7:124541400-124562000 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr7:124541400-124568800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr7:124541400-124568800 Weak transcription Fetal Intestine Small intestine
28 chr7:124541400-124569000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr7:124541400-124569000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr7:124541400-124569000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr7:124541400-124569400 Weak transcription Lung lung
32 chr7:124541600-124565800 Weak transcription Primary hematopoietic stem cells blood
33 chr7:124541600-124569200 Weak transcription Fetal Muscle Trunk muscle
34 chr7:124544600-124564400 Weak transcription Hela-S3 cervix
35 chr7:124548400-124569000 Weak transcription NH-A brain
36 chr7:124550200-124569200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr7:124550600-124566000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr7:124550600-124568800 Weak transcription Fetal Intestine Large intestine
39 chr7:124550800-124569000 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr7:124551000-124569000 Weak transcription HSMMtube muscle
41 chr7:124551400-124568800 Weak transcription Fetal Kidney kidney
42 chr7:124551800-124568800 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr7:124552400-124569000 Weak transcription H1 Cell Line embryonic stem cell
44 chr7:124553200-124568800 Weak transcription Fetal Thymus thymus
45 chr7:124553400-124566800 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr7:124553400-124568800 Weak transcription HMEC breast
47 chr7:124553800-124568400 Weak transcription Fetal Lung lung
48 chr7:124554600-124566400 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr7:124554600-124568600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr7:124555400-124562000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015