Variant report

Variant	rs2301930
Chromosome Location	chr7:124465097-124465098
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 334 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:330)

rs_ID	r²[population]
rs10081226	0.88[EUR][1000 genomes]
rs10081265	0.89[EUR][1000 genomes]
rs10081266	0.87[EUR][1000 genomes]
rs10081290	0.89[EUR][1000 genomes]
rs10081336	0.81[EUR][1000 genomes]
rs10081375	0.89[EUR][1000 genomes]
rs10085793	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10085867	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10085888	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1011721	0.88[EUR][1000 genomes]
rs1011722	0.89[EUR][1000 genomes]
rs1011723	0.89[EUR][1000 genomes]
rs10156168	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1021080	0.84[EUR][1000 genomes]
rs10223980	0.81[AFR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10224946	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10225140	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10227119	0.89[EUR][1000 genomes]
rs10227821	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10228376	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10228459	0.82[EUR][1000 genomes]
rs10228682	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10229152	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10231355	0.89[EUR][1000 genomes]
rs10231491	0.87[EUR][1000 genomes]
rs10231818	0.89[EUR][1000 genomes]
rs10233306	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10233589	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10236403	0.89[AFR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10236782	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10237080	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10239507	0.89[EUR][1000 genomes]
rs10243479	0.85[EUR][1000 genomes]
rs10243490	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10243736	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10243992	0.87[EUR][1000 genomes]
rs10244797	0.84[EUR][1000 genomes]
rs10245872	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10246553	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10250202	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10250911	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10252039	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10252072	0.88[EUR][1000 genomes]
rs10252443	0.81[EUR][1000 genomes]
rs10252579	0.84[EUR][1000 genomes]
rs10252798	0.84[EUR][1000 genomes]
rs10255209	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10255638	0.89[EUR][1000 genomes]
rs10257255	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10257712	0.89[EUR][1000 genomes]
rs10260227	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10260710	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10261610	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10263573	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10264288	0.89[EUR][1000 genomes]
rs10264766	0.87[EUR][1000 genomes]
rs10269011	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10270784	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10271687	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10272583	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10272889	0.89[EUR][1000 genomes]
rs10274820	0.84[EUR][1000 genomes]
rs10279816	0.88[EUR][1000 genomes]
rs10280341	0.89[EUR][1000 genomes]
rs1034795	0.80[AFR][1000 genomes]
rs10500098	0.83[EUR][1000 genomes]
rs10954045	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10954048	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10954049	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10954050	0.89[EUR][1000 genomes]
rs10954051	0.89[EUR][1000 genomes]
rs10954056	0.89[EUR][1000 genomes]
rs10954062	0.84[EUR][1000 genomes]
rs11763920	0.84[EUR][1000 genomes]
rs11767649	0.80[EUR][1000 genomes]
rs11767737	0.84[EUR][1000 genomes]
rs11769711	0.89[EUR][1000 genomes]
rs11975788	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11978628	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11978656	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11979724	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11980925	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11981797	0.89[EUR][1000 genomes]
rs11983251	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12111658	0.89[EUR][1000 genomes]
rs12111660	0.89[EUR][1000 genomes]
rs12112909	0.89[EUR][1000 genomes]
rs12154816	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12155120	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12530981	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12533560	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12536017	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12536146	0.89[EUR][1000 genomes]
rs12536575	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12537161	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12538083	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12538333	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12538641	0.89[EUR][1000 genomes]
rs12540168	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12666427	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12673697	0.85[ASN][1000 genomes]
rs12706626	0.86[EUR][1000 genomes]
rs12706629	0.89[EUR][1000 genomes]
rs13228116	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13231916	0.84[EUR][1000 genomes]
rs13240043	0.84[EUR][1000 genomes]
rs13240512	0.89[EUR][1000 genomes]
rs13307657	0.89[EUR][1000 genomes]
rs1383751	0.88[EUR][1000 genomes]
rs1468377	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1468378	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1481328	0.84[EUR][1000 genomes]
rs1481329	0.84[EUR][1000 genomes]
rs1481331	0.89[EUR][1000 genomes]
rs1481332	0.89[EUR][1000 genomes]
rs1481340	0.89[EUR][1000 genomes]
rs1481341	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1481343	0.83[EUR][1000 genomes]
rs1531715	0.84[EUR][1000 genomes]
rs1531716	0.84[EUR][1000 genomes]
rs1552119	0.84[EUR][1000 genomes]
rs1552120	0.84[EUR][1000 genomes]
rs1557969	0.85[ASN][1000 genomes]
rs1600738	0.84[EUR][1000 genomes]
rs1600739	0.84[EUR][1000 genomes]
rs1600740	0.83[EUR][1000 genomes]
rs1600743	0.89[EUR][1000 genomes]
rs1600745	0.88[EUR][1000 genomes]
rs1600746	0.89[EUR][1000 genomes]
rs16871295	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17147494	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17147496	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17147583	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1842615	0.87[EUR][1000 genomes]
rs1842616	0.89[EUR][1000 genomes]
rs1871770	0.84[EUR][1000 genomes]
rs1904975	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1994022	0.89[EUR][1000 genomes]
rs1994023	0.89[EUR][1000 genomes]
rs2040926	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2054585	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2079368	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2079369	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2107936	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2127971	0.89[EUR][1000 genomes]
rs2170353	0.88[EUR][1000 genomes]
rs2219954	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2267707	0.85[ASN][1000 genomes]
rs2267708	0.84[ASN][1000 genomes]
rs2286173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2286174	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2299902	0.85[ASN][1000 genomes]
rs2299903	0.85[ASN][1000 genomes]
rs2402749	0.84[ASN][1000 genomes]
rs2402753	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2402755	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2402756	0.89[EUR][1000 genomes]
rs2402760	0.85[EUR][1000 genomes]
rs2402762	0.89[EUR][1000 genomes]
rs28409696	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28491035	0.80[EUR][1000 genomes]
rs28807101	0.89[EUR][1000 genomes]
rs28817916	0.89[EUR][1000 genomes]
rs28820311	0.88[EUR][1000 genomes]
rs2896360	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2896361	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3213667	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs33935352	0.85[ASN][1000 genomes]
rs34014883	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34204767	0.84[ASN][1000 genomes]
rs34395250	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34600520	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34618371	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34630567	0.83[EUR][1000 genomes]
rs35184624	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35332300	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35630355	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3807544	0.85[ASN][1000 genomes]
rs3815221	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3919896	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4146110	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4279518	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4283967	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4311608	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4319000	0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4360235	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4377885	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4379394	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4383910	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4397336	0.88[EUR][1000 genomes]
rs4422720	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4461840	0.89[EUR][1000 genomes]
rs4463363	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4467880	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4501523	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4529402	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4552839	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4568548	0.86[AFR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4584095	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4728009	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4728010	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4728011	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4728012	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4731207	0.85[ASN][1000 genomes]
rs4731208	0.85[ASN][1000 genomes]
rs4731216	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4731217	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4731218	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4731221	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4731222	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4731223	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4731224	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56321660	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57458159	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62478914	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6415362	0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6466948	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6466949	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6466950	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6466952	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6466953	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6466954	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6466955	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6466956	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6466960	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6466961	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6466962	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6466963	0.88[EUR][1000 genomes]
rs6466964	0.89[EUR][1000 genomes]
rs6466965	0.88[EUR][1000 genomes]
rs6466966	0.89[EUR][1000 genomes]
rs6466967	0.89[EUR][1000 genomes]
rs6466968	0.89[EUR][1000 genomes]
rs6466969	0.89[EUR][1000 genomes]
rs6466970	0.89[EUR][1000 genomes]
rs6466971	0.86[EUR][1000 genomes]
rs6466972	0.89[EUR][1000 genomes]
rs6466982	0.83[EUR][1000 genomes]
rs6945104	0.84[AFR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6948181	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6948345	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6949341	0.87[AFR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6953168	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6954614	0.83[EUR][1000 genomes]
rs6956499	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6956638	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6959244	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6959491	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6959665	0.85[AFR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6960027	0.86[AFR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6960139	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6960504	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6960683	0.87[AFR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6963177	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6966415	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6967988	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6968187	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6968500	0.97[ASN][1000 genomes]
rs6968573	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6968693	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6971179	0.85[EUR][1000 genomes]
rs6971413	0.89[EUR][1000 genomes]
rs6973134	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6973447	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6973812	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6980448	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs71576215	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs719972	0.84[EUR][1000 genomes]
rs720615	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs720616	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs727506	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7357296	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7456392	0.83[AFR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7776744	0.85[EUR][1000 genomes]
rs7776821	0.83[EUR][1000 genomes]
rs7777126	0.89[EUR][1000 genomes]
rs7778544	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7778956	0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7779594	0.84[EUR][1000 genomes]
rs7780392	0.89[EUR][1000 genomes]
rs7780453	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7781148	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7782031	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7782327	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7782340	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7782354	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7782410	0.89[EUR][1000 genomes]
rs7782525	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7783781	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7786384	0.89[EUR][1000 genomes]
rs7787025	0.88[EUR][1000 genomes]
rs7787765	0.89[EUR][1000 genomes]
rs7788066	0.83[EUR][1000 genomes]
rs7788458	0.83[EUR][1000 genomes]
rs7789859	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7790975	0.89[EUR][1000 genomes]
rs7791399	0.89[EUR][1000 genomes]
rs7791488	0.84[EUR][1000 genomes]
rs7792883	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7793258	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7793441	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7794631	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7794710	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7795199	0.89[EUR][1000 genomes]
rs7795218	0.89[EUR][1000 genomes]
rs7795233	0.89[EUR][1000 genomes]
rs7795492	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7795605	0.89[EUR][1000 genomes]
rs7795611	0.89[EUR][1000 genomes]
rs7795934	0.84[EUR][1000 genomes]
rs7796015	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7796150	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7799518	0.89[EUR][1000 genomes]
rs7799523	0.89[EUR][1000 genomes]
rs7799535	0.89[EUR][1000 genomes]
rs7799747	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7799938	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7801140	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7802007	0.84[EUR][1000 genomes]
rs7802210	0.84[EUR][1000 genomes]
rs7806126	0.89[EUR][1000 genomes]
rs7807707	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7808203	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7811607	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7811608	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs886704	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9332427	0.89[EUR][1000 genomes]
rs962863	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9692367	0.83[EUR][1000 genomes]
rs9886177	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429809	chr7:123937674-124835925	Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
2	esv3446198	chr7:124358002-124586856	Flanking Bivalent TSS/Enh Strong transcription Weak transcription Bivalent/Poised TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv889134	chr7:124462081-124552802	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv889135	chr7:124462081-124584834	Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs2301930	RP11-3B12.4	cis	Artery Tibial	GTEx
rs2301930	RP11-3B12.1	cis	Artery Aorta	GTEx
rs2301930	RP11-3B12.1	cis	Artery Tibial	GTEx

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:124450800-124467000	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr7:124451600-124466600	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr7:124452800-124475000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr7:124454400-124497600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr7:124454600-124501400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr7:124457600-124497600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr7:124459000-124497800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr7:124459200-124467600	Weak transcription	Esophagus	oesophagus
9	chr7:124459200-124469000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr7:124459200-124497600	Weak transcription	Pancreas	Pancrea
11	chr7:124459200-124499400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr7:124459400-124497600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr7:124459400-124497600	Weak transcription	Brain Anterior Caudate	brain
14	chr7:124460200-124465800	Weak transcription	NH-A	brain
15	chr7:124460200-124466000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr7:124460200-124483400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr7:124460400-124488600	Weak transcription	HSMMtube	muscle
18	chr7:124460600-124486200	Weak transcription	Brain Substantia Nigra	brain
19	chr7:124460800-124476200	Weak transcription	Fetal Brain Male	brain
20	chr7:124461000-124499200	Weak transcription	Rectal Mucosa Donor 31	rectum
21	chr7:124461000-124499600	Weak transcription	Stomach Smooth Muscle	stomach
22	chr7:124461200-124465800	Weak transcription	Fetal Muscle Trunk	muscle
23	chr7:124461400-124530800	Weak transcription	NHDF-Ad	bronchial
24	chr7:124461600-124466600	Strong transcription	Primary T cells fromperipheralblood	blood
25	chr7:124461600-124466800	Strong transcription	Liver	Liver
26	chr7:124461600-124467200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr7:124461600-124467800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr7:124461600-124467800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr7:124461600-124490600	Weak transcription	Sigmoid Colon	Sigmoid Colon
30	chr7:124461600-124493400	Weak transcription	Primary neutrophils fromperipheralblood	blood
31	chr7:124461600-124499800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
32	chr7:124461800-124466600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr7:124461800-124466600	Strong transcription	Primary T helper cells fromperipheralblood	blood
34	chr7:124462000-124465400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
35	chr7:124462000-124466800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr7:124462000-124466800	Strong transcription	Adipose Nuclei	Adipose
37	chr7:124462000-124467200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr7:124462200-124466600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr7:124462200-124466600	Strong transcription	Monocytes-CD14+_RO01746	blood
40	chr7:124462200-124466800	Strong transcription	Duodenum Smooth Muscle	Duodenum
41	chr7:124462200-124467800	Strong transcription	Dnd41	blood
42	chr7:124462200-124468000	Strong transcription	Primary monocytes fromperipheralblood	blood
43	chr7:124462200-124474600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr7:124462200-124495000	Weak transcription	Brain Cingulate Gyrus	brain
45	chr7:124462200-124498200	Weak transcription	Psoas Muscle	Psoas
46	chr7:124462200-124510200	Weak transcription	Brain Angular Gyrus	brain
47	chr7:124462200-124568200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
48	chr7:124462400-124466000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
49	chr7:124462400-124466000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr7:124462400-124466800	Strong transcription	Primary T cells from cord blood	blood

The 2.0 version of rSNPBase

Variant report

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