Variant report

Variant rs12565492
Chromosome Location chr1:180490695-180490696
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180481800-180491200 Weak transcription H1 Cell Line embryonic stem cell
2 chr1:180485600-180490800 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr1:180485600-180490800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr1:180485600-180490800 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr1:180485800-180490800 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr1:180485800-180491200 Weak transcription HSMMtube muscle
7 chr1:180486000-180493400 Weak transcription Fetal Stomach stomach
8 chr1:180486000-180499400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr1:180486400-180490800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:180486400-180490800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:180486400-180490800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:180486400-180493800 Weak transcription Fetal Lung lung
13 chr1:180488000-180500400 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr1:180488200-180492200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:180488600-180497000 Enhancers Placenta Placenta
16 chr1:180488800-180490800 Enhancers HepG2 liver
17 chr1:180488800-180491800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:180489400-180490800 Weak transcription Fetal Muscle Leg muscle
19 chr1:180489400-180494400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:180489800-180494400 Weak transcription HUVEC blood vessel
21 chr1:180490400-180490800 Enhancers Lung lung
22 chr1:180490400-180491000 Enhancers Fetal Heart heart
23 chr1:180490400-180492000 Enhancers Placenta Amnion Placenta Amnion
24 chr1:180490600-180490800 Enhancers Left Ventricle heart
25 chr1:180490600-180491000 Enhancers NHEK skin
26 chr1:180490600-180491200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:180490600-180491200 Enhancers Skeletal Muscle Female skeletal muscle
28 chr1:180490600-180491200 Enhancers Hela-S3 cervix
29 chr1:180490600-180491200 Enhancers K562 blood
30 chr1:180490600-180491400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:180490600-180491400 Enhancers Right Ventricle heart
32 chr1:180490600-180491400 Enhancers A549 lung
33 chr1:180490600-180491600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:180490600-180491600 Enhancers Liver Liver
35 chr1:180490600-180491600 Enhancers Psoas Muscle Psoas
36 chr1:180490600-180491600 Enhancers Right Atrium heart
37 chr1:180490600-180491800 Enhancers Pancreas Pancrea
38 chr1:180490600-180492000 Enhancers ES-I3 Cell Line embryonic stem cell
39 chr1:180490600-180492000 Enhancers H9 Cell Line embryonic stem cell
40 chr1:180490600-180492000 Enhancers HUES6 Cell Line embryonic stem cell
41 chr1:180490600-180492400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:180490600-180492600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:180490600-180492800 Enhancers HMEC breast

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