Variant report

Variant rs11799870
Chromosome Location chr1:180449579-180449580
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180404400-180469000 Weak transcription Pancreas Pancrea
2 chr1:180421200-180451600 Weak transcription Muscle Satellite Cultured Cells --
3 chr1:180425800-180457600 Weak transcription Aorta Aorta
4 chr1:180428000-180470000 Weak transcription Rectal Smooth Muscle rectum
5 chr1:180429600-180455000 Weak transcription Left Ventricle heart
6 chr1:180430200-180454600 Weak transcription Thymus Thymus
7 chr1:180431200-180470200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:180432000-180451400 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr1:180432000-180470600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:180433600-180454200 Weak transcription Adipose Nuclei Adipose
11 chr1:180433800-180455000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:180434000-180465600 Weak transcription Fetal Brain Male brain
13 chr1:180434200-180470200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:180434400-180451400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:180434800-180451400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:180434800-180458800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:180435000-180456400 Weak transcription Fetal Kidney kidney
18 chr1:180435200-180454400 Weak transcription Fetal Muscle Trunk muscle
19 chr1:180435200-180469000 Weak transcription Brain Angular Gyrus brain
20 chr1:180436600-180450400 Weak transcription NHDF-Ad bronchial
21 chr1:180437600-180451400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr1:180437600-180454600 Weak transcription Gastric stomach
23 chr1:180437600-180455200 Weak transcription Ovary ovary
24 chr1:180437600-180470400 Weak transcription Right Ventricle heart
25 chr1:180437600-180470600 Weak transcription Spleen Spleen
26 chr1:180437600-180471000 Weak transcription Lung lung
27 chr1:180437800-180454400 Weak transcription Fetal Intestine Large intestine
28 chr1:180438200-180451400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr1:180438400-180453000 Weak transcription Placenta Placenta
30 chr1:180438600-180451400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr1:180438600-180454400 Weak transcription Fetal Thymus thymus
32 chr1:180438800-180451400 Weak transcription HUVEC blood vessel
33 chr1:180438800-180454400 Weak transcription HepG2 liver
34 chr1:180440000-180451800 Weak transcription Brain Hippocampus Middle brain
35 chr1:180440000-180455200 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:180440000-180469000 Weak transcription HSMMtube muscle
37 chr1:180440200-180468400 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:180440200-180469000 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr1:180441400-180451400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr1:180441400-180455200 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:180441600-180453800 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:180441800-180462800 Weak transcription NHLF lung
43 chr1:180442200-180451800 Weak transcription Hela-S3 cervix
44 chr1:180442200-180454800 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr1:180442200-180454800 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr1:180443400-180449600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:180443400-180468200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr1:180444800-180454800 Weak transcription Psoas Muscle Psoas
49 chr1:180444800-180470600 Weak transcription Esophagus oesophagus
50 chr1:180445200-180449600 Strong transcription Dnd41 blood

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