The 2.0 version of rSNPBase

Variant report

Variant rs6425641
Chromosome Location chr1:180486281-180486282
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180472800-180488800 Weak transcription Right Atrium heart
2 chr1:180481800-180491200 Weak transcription H1 Cell Line embryonic stem cell
3 chr1:180484800-180486400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:180484800-180486400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:180484800-180486400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr1:180484800-180486400 Enhancers HMEC breast
7 chr1:180484800-180486400 Enhancers NHLF lung
8 chr1:180485200-180486400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:180485200-180486400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:180485200-180486400 Enhancers Hela-S3 cervix
11 chr1:180485200-180486600 Enhancers HUVEC blood vessel
12 chr1:180485400-180486400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:180485400-180489000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:180485400-180489000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:180485600-180486400 Enhancers NHEK skin
16 chr1:180485600-180488800 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr1:180485600-180488800 Weak transcription HepG2 liver
18 chr1:180485600-180490600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:180485600-180490600 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:180485600-180490600 Weak transcription K562 blood
21 chr1:180485600-180490800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr1:180485600-180490800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr1:180485600-180490800 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:180485800-180490800 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr1:180485800-180491200 Weak transcription HSMMtube muscle
26 chr1:180486000-180486400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:180486000-180488000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:180486000-180490600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:180486000-180490600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:180486000-180493400 Weak transcription Fetal Stomach stomach
31 chr1:180486000-180499400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:180486200-180486400 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr1:180486200-180486400 Enhancers Fetal Lung lung
34 chr1:180486200-180490600 Weak transcription A549 lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015