Variant report
| Variant | rs1890731 |
|---|---|
| Chromosome Location | chr1:180488937-180488938 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:180481800-180491200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 2 | chr1:180485400-180489000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 3 | chr1:180485400-180489000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 4 | chr1:180485600-180490600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 5 | chr1:180485600-180490600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr1:180485600-180490600 | Weak transcription | K562 | blood |
| 7 | chr1:180485600-180490800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 8 | chr1:180485600-180490800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 9 | chr1:180485600-180490800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 10 | chr1:180485800-180490800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 11 | chr1:180485800-180491200 | Weak transcription | HSMMtube | muscle |
| 12 | chr1:180486000-180490600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr1:180486000-180490600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 14 | chr1:180486000-180493400 | Weak transcription | Fetal Stomach | stomach |
| 15 | chr1:180486000-180499400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 16 | chr1:180486200-180490600 | Weak transcription | A549 | lung |
| 17 | chr1:180486400-180490600 | Weak transcription | Hela-S3 | cervix |
| 18 | chr1:180486400-180490600 | Weak transcription | HMEC | breast |
| 19 | chr1:180486400-180490600 | Weak transcription | NHEK | skin |
| 20 | chr1:180486400-180490800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr1:180486400-180490800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 22 | chr1:180486400-180490800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 23 | chr1:180486400-180493800 | Weak transcription | Fetal Lung | lung |
| 24 | chr1:180487600-180490600 | Weak transcription | Pancreas | Pancrea |
| 25 | chr1:180488000-180500400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 26 | chr1:180488200-180492200 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 27 | chr1:180488600-180489400 | Enhancers | Fetal Muscle Leg | muscle |
| 28 | chr1:180488600-180497000 | Enhancers | Placenta | Placenta |
| 29 | chr1:180488800-180489000 | Enhancers | H9 Cell Line | embryonic stem cell |
| 30 | chr1:180488800-180489200 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 31 | chr1:180488800-180489200 | Flanking Active TSS | HUVEC | blood vessel |
| 32 | chr1:180488800-180489400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 33 | chr1:180488800-180489400 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 34 | chr1:180488800-180489400 | Enhancers | Right Atrium | heart |
| 35 | chr1:180488800-180490800 | Enhancers | HepG2 | liver |
| 36 | chr1:180488800-180491800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
