Variant report
| Variant | rs7538219 |
|---|---|
| Chromosome Location | chr1:180344012-180344013 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:180309600-180345400 | Weak transcription | Primary T cells from cord blood | blood |
| 2 | chr1:180310000-180348200 | Weak transcription | Primary B cells from cord blood | blood |
| 3 | chr1:180314000-180345800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 4 | chr1:180330200-180345400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 5 | chr1:180330600-180349000 | Weak transcription | HMEC | breast |
| 6 | chr1:180333000-180356200 | Weak transcription | Ovary | ovary |
| 7 | chr1:180334200-180348000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 8 | chr1:180335800-180349000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 9 | chr1:180336200-180344400 | Weak transcription | Psoas Muscle | Psoas |
| 10 | chr1:180336200-180347600 | Weak transcription | NHDF-Ad | bronchial |
| 11 | chr1:180337000-180349000 | Weak transcription | Esophagus | oesophagus |
| 12 | chr1:180337800-180348000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 13 | chr1:180338400-180345000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 14 | chr1:180338400-180348400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 15 | chr1:180338600-180347800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 16 | chr1:180338600-180347800 | Weak transcription | Aorta | Aorta |
| 17 | chr1:180338600-180348000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 18 | chr1:180338600-180349000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 19 | chr1:180338600-180349000 | Weak transcription | Left Ventricle | heart |
| 20 | chr1:180339600-180345400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 21 | chr1:180339600-180349000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 22 | chr1:180340400-180345400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 23 | chr1:180340800-180347600 | Weak transcription | HSMM | muscle |
| 24 | chr1:180341200-180401400 | Weak transcription | Osteobl | bone |
| 25 | chr1:180341800-180347000 | Weak transcription | Fetal Stomach | stomach |
| 26 | chr1:180342000-180344200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 27 | chr1:180342200-180346800 | Weak transcription | Fetal Intestine Small | intestine |
| 28 | chr1:180342200-180348000 | Weak transcription | Gastric | stomach |
| 29 | chr1:180343400-180348000 | Weak transcription | Fetal Lung | lung |
| 30 | chr1:180343600-180356400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 31 | chr1:180343800-180348000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 32 | chr1:180343800-180348200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 33 | chr1:180344000-180344600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
