The 2.0 version of rSNPBase

Variant report

Variant rs6657492
Chromosome Location chr1:180390500-180390501
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180341200-180401400 Weak transcription Osteobl bone
2 chr1:180349400-180407000 Weak transcription Esophagus oesophagus
3 chr1:180352800-180399400 Weak transcription Fetal Thymus thymus
4 chr1:180355200-180402600 Weak transcription HMEC breast
5 chr1:180355600-180390800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:180356600-180394000 Weak transcription NHDF-Ad bronchial
7 chr1:180356800-180406200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:180356800-180407000 Weak transcription Aorta Aorta
9 chr1:180360400-180394200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:180361400-180407600 Weak transcription HepG2 liver
11 chr1:180364000-180394200 Weak transcription HSMMtube muscle
12 chr1:180364400-180392800 Weak transcription Brain Cingulate Gyrus brain
13 chr1:180364400-180401600 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:180364600-180401000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:180365000-180391200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:180365000-180401000 Weak transcription Ovary ovary
17 chr1:180365200-180420600 Weak transcription A549 lung
18 chr1:180365400-180402600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:180366600-180393600 Weak transcription NH-A brain
20 chr1:180366800-180394000 Weak transcription Fetal Lung lung
21 chr1:180370600-180391400 Weak transcription Lung lung
22 chr1:180371200-180394400 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr1:180374600-180394200 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr1:180374600-180404000 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:180374800-180394000 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr1:180374800-180394000 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr1:180376200-180407400 Weak transcription NHLF lung
28 chr1:180376800-180395800 Weak transcription Colon Smooth Muscle Colon
29 chr1:180377000-180394200 Weak transcription Gastric stomach
30 chr1:180379000-180430800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:180379400-180393600 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr1:180379400-180394000 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr1:180379800-180406000 Weak transcription Left Ventricle heart
34 chr1:180380200-180396800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:180380400-180391200 Weak transcription Stomach Smooth Muscle stomach
36 chr1:180380400-180401000 Weak transcription Muscle Satellite Cultured Cells --
37 chr1:180380400-180408000 Weak transcription Primary T cells fromperipheralblood blood
38 chr1:180381200-180391600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:180381200-180393400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:180381200-180393600 Weak transcription Duodenum Mucosa Duodenum
41 chr1:180381200-180402800 Weak transcription NHEK skin
42 chr1:180381200-180406400 Weak transcription Fetal Stomach stomach
43 chr1:180381400-180391400 Weak transcription Fetal Intestine Small intestine
44 chr1:180381400-180401000 Weak transcription HSMM muscle
45 chr1:180381800-180393400 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr1:180381800-180397600 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:180382000-180390600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:180382200-180391000 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr1:180382400-180401000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:180382400-180410800 Weak transcription Primary Natural Killer cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015