Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:56644360..56646940-chr15:56655832..56657601,2	MCF-7	breast:
2	chr15:56654764..56656844-chr15:56657191..56659498,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000151575	Chromatin interaction

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10220822	0.89[ASN][1000 genomes]
rs10851607	0.94[ASN][1000 genomes]
rs1087836	0.84[AMR][1000 genomes]
rs1087838	0.84[AMR][1000 genomes]
rs11071265	0.97[ASN][1000 genomes]
rs11488881	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12438639	0.85[ASN][1000 genomes]
rs12443042	0.89[ASN][1000 genomes]
rs12443087	0.91[ASN][1000 genomes]
rs12593453	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12594941	1.00[EUR][1000 genomes]
rs1402173	0.97[ASN][1000 genomes]
rs1426065	0.97[ASN][1000 genomes]
rs16976847	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1863427	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2263567	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2554286	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2713903	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2718906	0.90[ASN][1000 genomes]
rs28408704	0.94[ASN][1000 genomes]
rs34431355	0.87[EUR][1000 genomes]
rs4142479	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs58619937	0.81[ASN][1000 genomes]
rs58851049	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs59232912	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60861096	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7177904	0.92[ASN][1000 genomes]
rs795784	0.84[AMR][1000 genomes]
rs8023554	0.85[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:56637800-56657000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr15:56644000-56656800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr15:56649600-56656800	Weak transcription	HMEC	breast
4	chr15:56654800-56656800	Weak transcription	Skeletal Muscle Male	skeletal muscle

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