Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10851607	0.83[ASN][1000 genomes]
rs11071265	0.87[ASN][1000 genomes]
rs11488881	0.82[ASN][1000 genomes]
rs12443087	0.82[ASN][1000 genomes]
rs12593348	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12593453	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12594941	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1402173	0.87[ASN][1000 genomes]
rs1426065	0.87[ASN][1000 genomes]
rs16976847	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1863427	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2263567	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2554286	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2713903	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2718906	0.92[ASN][1000 genomes]
rs28408704	0.85[ASN][1000 genomes]
rs34431355	0.87[EUR][1000 genomes]
rs4142479	0.85[ASN][1000 genomes]
rs59232912	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60861096	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7177904	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833019	chr15:56486029-56649933	Transcr. at gene 5' and 3' Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:56608600-56609600	Active TSS	iPS-15b Cell Line	embryonic stem cell

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