Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:56610567..56613374-chr15:56636228..56637875,2	K562	blood:
2	chr15:56620302..56622977-chr15:56634922..56636992,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10220822	0.85[ASN][1000 genomes]
rs10851607	0.89[ASN][1000 genomes]
rs11071265	0.94[ASN][1000 genomes]
rs11488881	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs12050881	0.85[AMR][1000 genomes]
rs12438639	0.83[ASN][1000 genomes]
rs12443042	0.85[ASN][1000 genomes]
rs12443087	0.88[ASN][1000 genomes]
rs12593348	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12593453	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12594941	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1402173	0.89[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs1426065	0.94[ASN][1000 genomes]
rs16976847	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1863427	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2554286	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2713903	0.88[EUR][1000 genomes]
rs2718906	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs28408704	0.91[ASN][1000 genomes]
rs34431355	0.87[EUR][1000 genomes]
rs4142479	0.91[ASN][1000 genomes]
rs58851049	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs59232912	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60861096	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7177904	0.82[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs8023554	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833019	chr15:56486029-56649933	Transcr. at gene 5' and 3' Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:56620800-56637600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr15:56633800-56637600	Weak transcription	Gastric	stomach
3	chr15:56635000-56638600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr15:56635200-56638600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr15:56635200-56642600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr15:56635400-56637400	Weak transcription	Stomach Mucosa	stomach
7	chr15:56635400-56638400	Weak transcription	NHEK	skin

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