Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1021062	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11098911	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11723741	0.83[EUR][1000 genomes]
rs11734026	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12504419	0.82[CEU][hapmap];0.81[CHB][hapmap]
rs12646249	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12647550	0.88[CEU][hapmap];0.90[CHB][hapmap]
rs12647626	0.84[CEU][hapmap];0.90[CHB][hapmap]
rs17011977	0.81[EUR][1000 genomes]
rs2219924	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34042860	0.81[EUR][1000 genomes]
rs4146424	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4833366	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4834161	0.82[EUR][1000 genomes]
rs56280971	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs67169994	0.81[EUR][1000 genomes]
rs6833994	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6834065	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6845689	0.88[CEU][hapmap];0.90[CHB][hapmap]
rs7680252	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs989212	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830055	chr4:127794875-127993821	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127990600-127993400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:127991800-127992400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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