Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10016117	0.84[CEU][hapmap]
rs1021062	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11098911	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11734026	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12504419	0.83[CHB][hapmap]
rs12643562	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12647550	0.96[CEU][hapmap];0.91[CHB][hapmap]
rs12647626	0.92[CEU][hapmap];0.91[CHB][hapmap];0.82[CHD][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap]
rs13118101	0.80[EUR][1000 genomes]
rs1397433	0.82[EUR][1000 genomes]
rs2219924	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4146424	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4833366	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs56280971	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs60923968	0.81[EUR][1000 genomes]
rs6833994	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6834065	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6845689	0.96[CEU][hapmap];0.91[CHB][hapmap];0.82[CHD][hapmap];0.83[GIH][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap]
rs7680252	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs989212	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830055	chr4:127794875-127993821	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127990600-127993400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:127991800-127992400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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