Variant report

Variant rs12658877
Chromosome Location chr5:37522527-37522528
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:37483000-37525400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr5:37489000-37548400 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr5:37493600-37522800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr5:37496200-37533200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr5:37496600-37541000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr5:37499200-37535800 Weak transcription Fetal Lung lung
7 chr5:37504000-37533000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr5:37507000-37533000 Weak transcription Adipose Nuclei Adipose
9 chr5:37513600-37535800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr5:37513800-37532600 Weak transcription Primary T cells from cord blood blood
11 chr5:37517200-37523600 Weak transcription K562 blood
12 chr5:37517800-37523000 Weak transcription HUVEC blood vessel
13 chr5:37518600-37533000 Weak transcription Duodenum Mucosa Duodenum
14 chr5:37518800-37523400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr5:37518800-37523400 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr5:37518800-37537800 Weak transcription Dnd41 blood
17 chr5:37519600-37525400 Weak transcription Primary T cells fromperipheralblood blood
18 chr5:37519600-37529600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr5:37519600-37535600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:37519600-37541000 Weak transcription Primary B cells from peripheral blood blood
21 chr5:37519800-37524600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr5:37519800-37533000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr5:37519800-37533000 Weak transcription Ovary ovary
24 chr5:37519800-37533000 Weak transcription Pancreas Pancrea
25 chr5:37519800-37533200 Weak transcription Aorta Aorta
26 chr5:37519800-37533200 Weak transcription Lung lung
27 chr5:37519800-37533200 Weak transcription Thymus Thymus
28 chr5:37519800-37533800 Weak transcription Gastric stomach
29 chr5:37519800-37534800 Weak transcription Right Ventricle heart
30 chr5:37519800-37535200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr5:37519800-37553600 Weak transcription Left Ventricle heart
32 chr5:37520000-37524000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr5:37520000-37533000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr5:37520000-37533000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr5:37520000-37540400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr5:37520000-37541600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr5:37520200-37533000 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr5:37520400-37523600 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr5:37520800-37538400 Weak transcription Colon Smooth Muscle Colon
40 chr5:37521200-37528400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr5:37521200-37541400 Weak transcription Liver Liver
42 chr5:37521400-37523800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr5:37521800-37522600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
44 chr5:37521800-37533000 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr5:37522200-37523000 Strong transcription Fetal Intestine Large intestine
46 chr5:37522200-37523400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr5:37522200-37523400 ZNF genes & repeats Fetal Stomach stomach
48 chr5:37522200-37523800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
49 chr5:37522400-37523200 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr5:37522400-37523600 ZNF genes & repeats Fetal Intestine Small intestine

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