The 2.0 version of rSNPBase

Variant report

Variant rs12716019
Chromosome Location chr4:56041094-56041095
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56035800-56042200 Weak transcription Right Atrium heart
2 chr4:56036000-56050600 Weak transcription Pancreas Pancrea
3 chr4:56036200-56041800 Weak transcription H9 Cell Line embryonic stem cell
4 chr4:56036200-56044400 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr4:56036800-56044600 Weak transcription Stomach Mucosa stomach
6 chr4:56037800-56042200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr4:56038600-56041600 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr4:56038600-56041600 Enhancers NHDF-Ad bronchial
9 chr4:56038800-56042000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr4:56039200-56041800 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr4:56039200-56041800 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr4:56039400-56041600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr4:56039400-56041600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr4:56039400-56041800 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr4:56039400-56042200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr4:56039400-56043800 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr4:56039600-56041400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr4:56039600-56041600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr4:56039600-56041600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr4:56039600-56041600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr4:56039600-56041600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr4:56039600-56042000 Enhancers HUVEC blood vessel
23 chr4:56039600-56042200 Weak transcription Placenta Placenta
24 chr4:56039600-56043800 Weak transcription Fetal Muscle Leg muscle
25 chr4:56039800-56041600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr4:56040000-56041400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr4:56040000-56041400 Weak transcription HMEC breast
28 chr4:56040000-56041600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr4:56040000-56041600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr4:56040000-56041600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr4:56040000-56041600 Weak transcription NHEK skin
32 chr4:56040200-56041200 Weak transcription NH-A brain
33 chr4:56040200-56041200 Weak transcription NHLF lung
34 chr4:56040200-56041400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr4:56040200-56041600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr4:56040200-56041600 Weak transcription Hela-S3 cervix
37 chr4:56040200-56041600 Weak transcription HSMM muscle
38 chr4:56040800-56041200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr4:56040800-56042000 Enhancers Osteobl bone
40 chr4:56041000-56041400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr4:56041000-56041400 Enhancers Placenta Amnion Placenta Amnion
42 chr4:56041000-56041600 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015