Variant report

Variant rs12721544
Chromosome Location chr3:50231827-50231828
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50210400-50242400 Weak transcription Right Atrium heart
2 chr3:50225800-50232200 Weak transcription H9 Cell Line embryonic stem cell
3 chr3:50226400-50232200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:50226600-50239800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:50229400-50232800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:50230000-50232000 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
7 chr3:50230000-50232400 Bivalent Enhancer Primary B cells from peripheral blood blood
8 chr3:50230000-50233800 Bivalent Enhancer Fetal Muscle Trunk muscle
9 chr3:50230200-50232200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr3:50230200-50232400 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr3:50230200-50232400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
12 chr3:50230200-50232400 Bivalent Enhancer Placenta Placenta
13 chr3:50230200-50232400 Bivalent Enhancer Fetal Stomach stomach
14 chr3:50230200-50233200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
15 chr3:50230200-50233800 Bivalent Enhancer Fetal Muscle Leg muscle
16 chr3:50230400-50232000 Bivalent Enhancer Colon Smooth Muscle Colon
17 chr3:50230400-50232200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr3:50230400-50232400 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
19 chr3:50230400-50232400 Bivalent Enhancer Fetal Brain Male brain
20 chr3:50230400-50233800 Bivalent Enhancer Fetal Intestine Large intestine
21 chr3:50230600-50232000 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
22 chr3:50230600-50232400 Bivalent Enhancer Fetal Heart heart
23 chr3:50230800-50232000 Bivalent Enhancer Esophagus oesophagus
24 chr3:50230800-50232200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
25 chr3:50231000-50232400 Enhancers Ovary ovary
26 chr3:50231200-50232000 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr3:50231200-50232000 Bivalent Enhancer Primary hematopoietic stem cells blood
28 chr3:50231200-50232000 Bivalent Enhancer Spleen Spleen
29 chr3:50231200-50232200 Bivalent Enhancer Primary B cells from cord blood blood
30 chr3:50231200-50232200 Bivalent Enhancer Adipose Nuclei Adipose
31 chr3:50231200-50233200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr3:50231200-50233600 Enhancers Pancreas Pancrea
33 chr3:50231400-50232000 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
34 chr3:50231400-50232000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
35 chr3:50231400-50232000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
36 chr3:50231400-50232000 Bivalent Enhancer Primary mononuclear cells fromperipheralblood Blood
37 chr3:50231400-50232000 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
38 chr3:50231400-50232200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
39 chr3:50231400-50232200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
40 chr3:50231400-50232200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
41 chr3:50231400-50232200 Enhancers Lung lung
42 chr3:50231400-50232400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
43 chr3:50231400-50232400 Bivalent Enhancer Fetal Thymus thymus
44 chr3:50231400-50232400 Enhancers Gastric stomach
45 chr3:50231400-50232400 Bivalent Enhancer Placenta Amnion Placenta Amnion
46 chr3:50231400-50233400 Bivalent Enhancer Fetal Intestine Small intestine
47 chr3:50231600-50232000 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
48 chr3:50231600-50232000 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
49 chr3:50231600-50232000 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
50 chr3:50231600-50232000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood

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