Variant report
| Variant | rs12809441 |
|---|---|
| Chromosome Location | chr12:26302161-26302162 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
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rSNPs within LD-proxies of this variant (count:34)
| rs_ID | r2[population] |
|---|---|
| rs10743574 | 0.90[ASN][1000 genomes] |
| rs10771262 | 0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs10771263 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs10842680 | 0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs10842682 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs12314653 | 0.82[ASN][1000 genomes] |
| rs12315774 | 0.82[ASN][1000 genomes] |
| rs12316258 | 0.82[ASN][1000 genomes] |
| rs1480036 | 0.81[CHB][hapmap];0.81[JPT][hapmap] |
| rs17366851 | 0.85[EUR][1000 genomes] |
| rs17366886 | 0.85[EUR][1000 genomes] |
| rs17464154 | 0.85[EUR][1000 genomes] |
| rs17464196 | 0.85[EUR][1000 genomes] |
| rs2004824 | 0.85[EUR][1000 genomes] |
| rs2343865 | 0.90[ASN][1000 genomes] |
| rs2343868 | 0.86[ASN][1000 genomes] |
| rs4963649 | 0.85[EUR][1000 genomes] |
| rs4963959 | 0.85[EUR][1000 genomes] |
| rs55752345 | 0.85[EUR][1000 genomes] |
| rs55830812 | 0.90[ASN][1000 genomes] |
| rs56008051 | 0.85[EUR][1000 genomes] |
| rs56319243 | 0.85[EUR][1000 genomes] |
| rs57252419 | 0.89[ASN][1000 genomes] |
| rs59864248 | 0.85[EUR][1000 genomes] |
| rs59864950 | 0.89[ASN][1000 genomes] |
| rs61914465 | 0.82[ASN][1000 genomes] |
| rs61915726 | 0.85[EUR][1000 genomes] |
| rs6487532 | 0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs748775 | 0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs7955859 | 0.82[ASN][1000 genomes] |
| rs7958409 | 0.81[ASN][1000 genomes] |
| rs7976236 | 0.82[ASN][1000 genomes] |
| rs7978769 | 0.89[ASN][1000 genomes] |
| rs875295 | 0.86[CHB][hapmap];0.85[JPT][hapmap];0.81[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:26288600-26306600 | Weak transcription | Aorta | Aorta |
| 2 | chr12:26301400-26306000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
