Variant report

Variant	rs2343865
Chromosome Location	chr12:26314815-26314816
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:26312247..26313846-chr12:26314079..26315975,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10743574	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10771262	0.84[ASN][1000 genomes]
rs10771263	0.88[ASN][1000 genomes]
rs10842680	0.84[ASN][1000 genomes]
rs10842682	0.85[ASN][1000 genomes]
rs12314653	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12315774	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12316258	0.90[ASN][1000 genomes]
rs12809441	0.90[ASN][1000 genomes]
rs1480036	0.90[CHB][hapmap];0.86[CHD][hapmap];0.90[JPT][hapmap];0.85[ASN][1000 genomes]
rs16930176	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs16930227	0.99[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17366851	0.83[AFR][1000 genomes]
rs17366886	0.83[AFR][1000 genomes]
rs17380837	0.81[CEU][hapmap];0.80[CHB][hapmap]
rs17464154	0.87[AFR][1000 genomes]
rs17464196	0.81[AFR][1000 genomes]
rs2004824	0.83[AFR][1000 genomes]
rs2343868	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35878200	0.99[EUR][1000 genomes]
rs4963649	0.83[AFR][1000 genomes]
rs4963959	0.83[AFR][1000 genomes]
rs55830812	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55889673	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs57252419	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59864248	0.83[AFR][1000 genomes]
rs59864950	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61914465	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61915724	0.95[EUR][1000 genomes]
rs61915726	0.83[AFR][1000 genomes]
rs6487532	0.84[ASN][1000 genomes]
rs748775	0.84[ASN][1000 genomes]
rs7953277	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7955859	0.90[ASN][1000 genomes]
rs7958409	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7976236	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7978769	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs875295	0.80[ASW][hapmap];0.82[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26308000-26316800	Weak transcription	HMEC	breast
2	chr12:26310200-26316600	Enhancers	Primary B cells from peripheral blood	blood
3	chr12:26312200-26315600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:26312400-26317200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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