Variant report

Variant	rs55830812
Chromosome Location	chr12:26317931-26317932
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10743574	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10771262	0.84[ASN][1000 genomes]
rs10771263	0.88[ASN][1000 genomes]
rs10842680	0.84[ASN][1000 genomes]
rs10842682	0.85[ASN][1000 genomes]
rs12314653	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12315774	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12316258	0.90[ASN][1000 genomes]
rs12809441	0.90[ASN][1000 genomes]
rs1480036	0.85[ASN][1000 genomes]
rs16930176	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs16930227	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2343865	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2343868	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35878200	0.99[EUR][1000 genomes]
rs55889673	0.98[EUR][1000 genomes]
rs57252419	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59864950	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61914465	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61915724	0.95[EUR][1000 genomes]
rs6487532	0.84[ASN][1000 genomes]
rs748775	0.84[ASN][1000 genomes]
rs7953277	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7955859	0.90[ASN][1000 genomes]
rs7958409	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7976236	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7978769	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs875295	0.90[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26317200-26319400	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr12:26317400-26318400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr12:26317800-26318200	Weak transcription	HMEC	breast

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