Variant report

Variant	rs7978769
Chromosome Location	chr12:26320587-26320588
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10743574	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10771262	0.83[ASN][1000 genomes]
rs10771263	0.87[ASN][1000 genomes]
rs10842680	0.83[ASN][1000 genomes]
rs10842682	0.85[ASN][1000 genomes]
rs12314653	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12315774	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12316258	0.90[ASN][1000 genomes]
rs12809441	0.89[ASN][1000 genomes]
rs1480036	0.90[CHB][hapmap];0.86[CHD][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs16930176	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs16930227	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17380837	0.81[CEU][hapmap];0.80[CHB][hapmap]
rs17464154	0.82[AFR][1000 genomes]
rs2343865	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2343868	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35878200	0.99[EUR][1000 genomes]
rs55830812	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs55889673	0.98[EUR][1000 genomes]
rs57252419	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59864950	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61914465	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61915724	0.95[EUR][1000 genomes]
rs6487532	0.83[ASN][1000 genomes]
rs748775	0.83[ASN][1000 genomes]
rs7953277	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7955859	0.90[ASN][1000 genomes]
rs7958409	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7976236	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs875295	0.80[ASW][hapmap];0.82[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap];0.81[MKK][hapmap];0.89[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26319000-26321400	Weak transcription	Brain Substantia Nigra	brain
2	chr12:26319000-26325200	Weak transcription	Brain Anterior Caudate	brain
3	chr12:26319400-26321000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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