Variant report

Variant	rs12932850
Chromosome Location	chr16:71668634-71668635
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:71668341..71670182-chr16:71677520..71679473,2	MCF-7	breast:
2	chr16:71659335..71662004-chr16:71667877..71670803,3	MCF-7	breast:
3	chr16:71668579..71670328-chr16:71676094..71677931,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000140832	Chromatin interaction
ENSG00000260593	Chromatin interaction

Extended variants
information (count: 146 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:143)

rs_ID	r²[population]
rs1035545	0.93[ASW][hapmap];1.00[CEU][hapmap];0.97[GIH][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10500559	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1058747	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[CHD][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.87[MEX][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11075889	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11075890	0.84[ASN][1000 genomes]
rs11075891	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11075892	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11075895	0.94[GIH][hapmap];0.83[JPT][hapmap]
rs11075900	0.88[EUR][1000 genomes]
rs11075902	0.84[EUR][1000 genomes]
rs11539980	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.89[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11641873	0.87[EUR][1000 genomes]
rs11643690	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11645467	0.88[EUR][1000 genomes]
rs11646635	0.88[EUR][1000 genomes]
rs11646748	0.88[EUR][1000 genomes]
rs11647873	0.84[ASN][1000 genomes]
rs11648240	0.92[CEU][hapmap];0.93[CHB][hapmap];0.94[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.87[TSI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11648674	1.00[CEU][hapmap];0.89[JPT][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11859729	0.94[GIH][hapmap];0.89[JPT][hapmap]
rs11862798	0.81[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.87[TSI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11866795	0.85[CHB][hapmap];0.88[JPT][hapmap]
rs12051443	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12051449	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12051506	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12444484	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12447856	0.93[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.91[LWK][hapmap];0.96[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.81[YRI][hapmap];0.85[EUR][1000 genomes]
rs12448226	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12597065	1.00[CEU][hapmap];0.94[JPT][hapmap];0.95[YRI][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12598902	0.96[CEU][hapmap];0.89[JPT][hapmap]
rs12920243	1.00[CEU][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes]
rs12924258	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12925587	0.81[EUR][1000 genomes]
rs12926987	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12927320	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12930206	1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.87[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes]
rs12930418	0.87[ASN][1000 genomes]
rs12935426	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1392483	1.00[CEU][hapmap];0.94[JPT][hapmap]
rs1392487	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1477386	0.87[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs1582589	1.00[CEU][hapmap];0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs172649	0.83[CEU][hapmap];0.93[CHB][hapmap];0.88[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.87[TSI][hapmap];0.82[AMR][1000 genomes]
rs172650	0.87[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.87[TSI][hapmap];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2032920	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2036337	0.88[EUR][1000 genomes]
rs2036338	0.93[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.91[LWK][hapmap];0.91[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.81[YRI][hapmap];0.88[EUR][1000 genomes]
rs2113222	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2270830	0.87[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.89[LWK][hapmap];0.96[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes]
rs2270831	0.93[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.89[LWK][hapmap];0.96[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes]
rs2270832	0.95[CEU][hapmap];0.94[JPT][hapmap];0.84[YRI][hapmap];0.88[EUR][1000 genomes]
rs2278031	0.93[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.89[LWK][hapmap];0.92[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2303224	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2303225	1.00[CEU][hapmap];0.94[JPT][hapmap];0.81[YRI][hapmap];0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2334879	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2334883	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2334884	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2432519	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2432520	0.87[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.87[TSI][hapmap];0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2432524	0.92[CEU][hapmap];0.81[CHB][hapmap];0.91[CHD][hapmap];0.86[GIH][hapmap];0.81[TSI][hapmap]
rs28439683	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs28582831	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28636800	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs28704189	0.81[EUR][1000 genomes]
rs310331	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs34161748	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs34401601	0.82[EUR][1000 genomes]
rs34734042	0.88[EUR][1000 genomes]
rs34764568	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35173463	0.88[EUR][1000 genomes]
rs35939203	0.87[ASN][1000 genomes]
rs3751817	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3752681	0.93[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[CHD][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3829537	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.87[TSI][hapmap];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3925658	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4444347	0.89[JPT][hapmap]
rs4788442	0.88[EUR][1000 genomes]
rs4788544	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4788546	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4788547	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4788549	1.00[CEU][hapmap];0.94[JPT][hapmap];0.86[YRI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4788551	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4788552	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4788554	0.88[EUR][1000 genomes]
rs4788558	0.87[ASW][hapmap];1.00[CEU][hapmap];0.92[GIH][hapmap];0.94[JPT][hapmap];0.86[LWK][hapmap];0.96[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes]
rs4788808	0.83[JPT][hapmap]
rs4788809	0.81[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.87[TSI][hapmap];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4788812	0.92[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.85[YRI][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4788814	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4788817	0.92[CEU][hapmap];0.86[CHD][hapmap];0.83[JPT][hapmap];0.80[MEX][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4788821	1.00[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4788826	1.00[CEU][hapmap];0.94[JPT][hapmap];0.94[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4788827	1.00[CEU][hapmap];0.94[JPT][hapmap];0.95[YRI][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs57997630	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60881203	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62053077	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62053078	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62053107	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62053108	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7185997	1.00[CEU][hapmap];0.94[JPT][hapmap];0.81[YRI][hapmap];0.85[EUR][1000 genomes]
rs7186717	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7188406	0.93[CHB][hapmap];0.91[CHD][hapmap];0.92[GIH][hapmap];0.83[JPT][hapmap];0.86[ASN][1000 genomes]
rs7195840	0.91[ASN][1000 genomes]
rs7201754	0.94[GIH][hapmap];0.89[JPT][hapmap];0.91[LWK][hapmap];0.88[MKK][hapmap];0.95[YRI][hapmap]
rs7202288	0.94[GIH][hapmap];0.89[JPT][hapmap]
rs7203231	0.94[GIH][hapmap];0.89[JPT][hapmap]
rs7206039	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7404381	0.85[EUR][1000 genomes]
rs8048057	0.93[ASW][hapmap];1.00[CEU][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.84[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8048210	1.00[ASW][hapmap];1.00[CEU][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8052489	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8052999	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs8056823	0.86[ASN][1000 genomes]
rs8060867	1.00[CEU][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes]
rs8061970	0.94[GIH][hapmap];0.89[JPT][hapmap]
rs8062441	0.83[EUR][1000 genomes]
rs8062477	0.84[EUR][1000 genomes]
rs8203	0.93[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[CHD][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs918721	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.89[JPT][hapmap];0.91[LWK][hapmap];0.96[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs951453	0.88[EUR][1000 genomes]
rs951939	1.00[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap];0.84[EUR][1000 genomes]
rs979789	0.86[CHB][hapmap];0.94[CHD][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes]
rs9921270	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9922054	0.82[EUR][1000 genomes]
rs9923264	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9923336	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9925069	0.81[EUR][1000 genomes]
rs9925228	1.00[ASW][hapmap];1.00[CEU][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9927336	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9927437	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9930543	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9931717	0.80[EUR][1000 genomes]
rs9932415	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9933961	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9936903	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9937280	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9939455	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.91[LWK][hapmap];0.96[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.85[EUR][1000 genomes]
rs9939471	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9939658	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9940142	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9940217	1.00[CEU][hapmap];0.94[JPT][hapmap];0.90[YRI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9940707	0.94[GIH][hapmap];0.89[JPT][hapmap]
rs9940990	1.00[CEU][hapmap];0.94[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3347477	chr16:71555148-71985177	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv1063338	chr16:71612346-71752968	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	nsv962218	chr16:71645202-71727606	Flanking Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs12932850	ZNF23	cis	parietal	SCAN
rs12932850	MARVELD3	cis	lymphoblastoid	seeQTL

Chromatin state (count:66 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:71661000-71671000	Weak transcription	Right Atrium	heart
2	chr16:71661000-71674200	Weak transcription	Gastric	stomach
3	chr16:71661800-71682000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr16:71662000-71674200	Weak transcription	Lung	lung
5	chr16:71662200-71671200	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr16:71662600-71682000	Weak transcription	Rectal Smooth Muscle	rectum
7	chr16:71662800-71673600	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr16:71663000-71669600	Strong transcription	Rectal Mucosa Donor 29	rectum
9	chr16:71663000-71670800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr16:71663200-71670000	Strong transcription	HUES48 Cell Line	embryonic stem cell
11	chr16:71663200-71670600	Weak transcription	Osteobl	bone
12	chr16:71663200-71670800	Weak transcription	Ovary	ovary
13	chr16:71663200-71671000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr16:71663200-71673800	Weak transcription	Brain Hippocampus Middle	brain
15	chr16:71663200-71676800	Weak transcription	Fetal Kidney	kidney
16	chr16:71663400-71668800	Strong transcription	Rectal Mucosa Donor 31	rectum
17	chr16:71663400-71669200	Strong transcription	Fetal Intestine Small	intestine
18	chr16:71663400-71669400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr16:71663400-71670000	Strong transcription	H1 Cell Line	embryonic stem cell
20	chr16:71663400-71674200	Weak transcription	Adipose Nuclei	Adipose
21	chr16:71663400-71674200	Weak transcription	Aorta	Aorta
22	chr16:71663400-71674400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr16:71663400-71674400	Weak transcription	Esophagus	oesophagus
24	chr16:71663400-71678400	Weak transcription	Fetal Lung	lung
25	chr16:71663600-71686600	Weak transcription	Small Intestine	intestine
26	chr16:71663800-71669800	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr16:71663800-71673800	Weak transcription	Stomach Smooth Muscle	stomach
28	chr16:71663800-71674200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr16:71663800-71680600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr16:71663800-71681400	Weak transcription	Left Ventricle	heart
31	chr16:71663800-71681400	Weak transcription	HepG2	liver
32	chr16:71664000-71669600	Weak transcription	Brain Cingulate Gyrus	brain
33	chr16:71664000-71671000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr16:71664200-71670400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr16:71664600-71682800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr16:71665000-71671000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr16:71665200-71673000	Strong transcription	Fetal Intestine Large	intestine
38	chr16:71665200-71673800	Weak transcription	Liver	Liver
39	chr16:71665200-71674200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr16:71665200-71682800	Weak transcription	HMEC	breast
41	chr16:71665400-71674200	Weak transcription	Brain Germinal Matrix	brain
42	chr16:71666000-71670000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr16:71666200-71671000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr16:71666200-71671000	Weak transcription	Fetal Heart	heart
45	chr16:71666200-71674200	Weak transcription	Placenta Amnion	Placenta Amnion
46	chr16:71666400-71671000	Weak transcription	HUES64 Cell Line	embryonic stem cell
47	chr16:71667000-71669000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr16:71667000-71672000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
49	chr16:71667600-71669800	Strong transcription	Sigmoid Colon	Sigmoid Colon
50	chr16:71667800-71669000	Strong transcription	Pancreas	Pancrea

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