The 2.0 version of rSNPBase

Variant report

Variant rs13149411
Chromosome Location chr4:6922023-6922024
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:6912600-6925400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr4:6913200-6922600 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr4:6913200-6925200 Weak transcription NHLF lung
4 chr4:6916800-6923200 Enhancers Fetal Thymus thymus
5 chr4:6917000-6924200 Genic enhancers Fetal Intestine Small intestine
6 chr4:6917200-6922400 Enhancers Fetal Stomach stomach
7 chr4:6917200-6922600 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr4:6918600-6925000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr4:6918600-6925200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr4:6918600-6925200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr4:6918600-6925400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr4:6918800-6925000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr4:6918800-6925200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:6918800-6925200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr4:6918800-6925400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr4:6919000-6924000 Enhancers Primary T cells fromperipheralblood blood
17 chr4:6919000-6925200 Weak transcription Placenta Amnion Placenta Amnion
18 chr4:6919000-6925200 Weak transcription NHEK skin
19 chr4:6919000-6928000 Weak transcription Fetal Kidney kidney
20 chr4:6919200-6923200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr4:6919200-6925400 Weak transcription HSMMtube muscle
22 chr4:6919600-6925200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr4:6919600-6925200 Weak transcription Ovary ovary
24 chr4:6919600-6925600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr4:6919600-6942200 Weak transcription Hela-S3 cervix
26 chr4:6919800-6925000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr4:6920000-6922600 Enhancers Primary T helper cells fromperipheralblood blood
28 chr4:6920000-6925200 Weak transcription Brain Angular Gyrus brain
29 chr4:6920200-6925200 Weak transcription Brain Inferior Temporal Lobe brain
30 chr4:6920200-6925200 Weak transcription Colon Smooth Muscle Colon
31 chr4:6920200-6925200 Weak transcription Right Ventricle heart
32 chr4:6920200-6925400 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr4:6920200-6927600 Weak transcription Right Atrium heart
34 chr4:6920200-6939600 Weak transcription HUVEC blood vessel
35 chr4:6920400-6922400 Enhancers Duodenum Mucosa Duodenum
36 chr4:6920400-6923000 Enhancers Primary T helper cells PMA-I stimulated --
37 chr4:6920400-6923200 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr4:6920400-6923800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr4:6920400-6925000 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr4:6920400-6925000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr4:6920400-6925000 Weak transcription Colonic Mucosa Colon
42 chr4:6920400-6925000 Weak transcription Dnd41 blood
43 chr4:6920400-6925200 Weak transcription H1 Cell Line embryonic stem cell
44 chr4:6920400-6925200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr4:6920400-6925200 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr4:6920400-6925200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr4:6920400-6925200 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr4:6920400-6925200 Weak transcription Brain Cingulate Gyrus brain
49 chr4:6920400-6925200 Weak transcription Brain Germinal Matrix brain
50 chr4:6920400-6925200 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015