The 2.0 version of rSNPBase

Variant report

Variant rs34335938
Chromosome Location chr4:6921124-6921125
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:6912600-6925400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr4:6913200-6922600 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr4:6913200-6925200 Weak transcription NHLF lung
4 chr4:6915800-6921200 Enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr4:6915800-6921400 Enhancers Primary monocytes fromperipheralblood blood
6 chr4:6916800-6923200 Enhancers Fetal Thymus thymus
7 chr4:6917000-6924200 Genic enhancers Fetal Intestine Small intestine
8 chr4:6917200-6922400 Enhancers Fetal Stomach stomach
9 chr4:6917200-6922600 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr4:6917800-6921400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
11 chr4:6918400-6921200 Enhancers Primary mononuclear cells fromperipheralblood Blood
12 chr4:6918600-6925000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr4:6918600-6925200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr4:6918600-6925200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr4:6918600-6925400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr4:6918800-6925000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr4:6918800-6925200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr4:6918800-6925200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr4:6918800-6925400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr4:6919000-6921200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
21 chr4:6919000-6922000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr4:6919000-6924000 Enhancers Primary T cells fromperipheralblood blood
23 chr4:6919000-6925200 Weak transcription Placenta Amnion Placenta Amnion
24 chr4:6919000-6925200 Weak transcription NHEK skin
25 chr4:6919000-6928000 Weak transcription Fetal Kidney kidney
26 chr4:6919200-6921400 Enhancers Primary hematopoietic stem cells blood
27 chr4:6919200-6923200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr4:6919200-6925400 Weak transcription HSMMtube muscle
29 chr4:6919600-6925200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr4:6919600-6925200 Weak transcription Ovary ovary
31 chr4:6919600-6925600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr4:6919600-6942200 Weak transcription Hela-S3 cervix
33 chr4:6919800-6925000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr4:6920000-6922000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr4:6920000-6922600 Enhancers Primary T helper cells fromperipheralblood blood
36 chr4:6920000-6925200 Weak transcription Brain Angular Gyrus brain
37 chr4:6920200-6925200 Weak transcription Brain Inferior Temporal Lobe brain
38 chr4:6920200-6925200 Weak transcription Colon Smooth Muscle Colon
39 chr4:6920200-6925200 Weak transcription Right Ventricle heart
40 chr4:6920200-6925400 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr4:6920200-6927600 Weak transcription Right Atrium heart
42 chr4:6920200-6939600 Weak transcription HUVEC blood vessel
43 chr4:6920400-6921400 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr4:6920400-6921800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr4:6920400-6921800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr4:6920400-6921800 Weak transcription Brain Substantia Nigra brain
47 chr4:6920400-6922000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr4:6920400-6922000 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr4:6920400-6922000 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr4:6920400-6922400 Enhancers Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015