Variant report
| Variant | rs13108082 |
|---|---|
| Chromosome Location | chr4:6941160-6941161 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:6919600-6942200 | Weak transcription | Hela-S3 | cervix |
| 2 | chr4:6926200-6942000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 3 | chr4:6926200-6942600 | Weak transcription | NHEK | skin |
| 4 | chr4:6926200-6943200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 5 | chr4:6928000-6942000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 6 | chr4:6928000-6969600 | Weak transcription | Aorta | Aorta |
| 7 | chr4:6929000-6942000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 8 | chr4:6929000-6942200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 9 | chr4:6929200-6942000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 10 | chr4:6929400-6942400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 11 | chr4:6929600-6942400 | Weak transcription | Small Intestine | intestine |
| 12 | chr4:6929800-6943200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 13 | chr4:6931400-6943200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 14 | chr4:6931600-6942000 | Weak transcription | Colon Smooth Muscle | Colon |
| 15 | chr4:6932000-6941600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 16 | chr4:6932000-6942000 | Weak transcription | Stomach Mucosa | stomach |
| 17 | chr4:6932000-6943400 | Weak transcription | Fetal Brain Female | brain |
| 18 | chr4:6932000-6943400 | Weak transcription | Fetal Kidney | kidney |
| 19 | chr4:6932200-6943200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr4:6933400-6942200 | Weak transcription | Psoas Muscle | Psoas |
| 21 | chr4:6934400-6946400 | Enhancers | Placenta | Placenta |
| 22 | chr4:6935400-6943200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 23 | chr4:6936000-6943200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr4:6937400-6941800 | Weak transcription | A549 | lung |
| 25 | chr4:6937400-6942400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 26 | chr4:6937800-6941400 | Genic enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 27 | chr4:6939000-6945600 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 28 | chr4:6939000-6946800 | Enhancers | Adipose Nuclei | Adipose |
| 29 | chr4:6939200-6941200 | Genic enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 30 | chr4:6939200-6941200 | Enhancers | Fetal Muscle Leg | muscle |
| 31 | chr4:6939200-6941200 | Genic enhancers | Spleen | Spleen |
| 32 | chr4:6939200-6941400 | Enhancers | Brain Substantia Nigra | brain |
| 33 | chr4:6939200-6941400 | Genic enhancers | Duodenum Mucosa | Duodenum |
| 34 | chr4:6939200-6941600 | Genic enhancers | Colonic Mucosa | Colon |
| 35 | chr4:6939200-6942000 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 36 | chr4:6939200-6942400 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 37 | chr4:6939200-6942400 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 38 | chr4:6939200-6942400 | Enhancers | Right Ventricle | heart |
| 39 | chr4:6939200-6942600 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 40 | chr4:6939200-6943200 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 41 | chr4:6939200-6943200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 42 | chr4:6939200-6943400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 43 | chr4:6939200-6943400 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 44 | chr4:6939200-6943800 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 45 | chr4:6939200-6946200 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 46 | chr4:6939200-6947000 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 47 | chr4:6939200-6947200 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 48 | chr4:6939200-6948000 | Enhancers | H1 Cell Line | embryonic stem cell |
| 49 | chr4:6939400-6941600 | Enhancers | GM12878-XiMat | blood |
| 50 | chr4:6939400-6941800 | Genic enhancers | Primary mononuclear cells fromperipheralblood | Blood |
