Variant report
| Variant | rs13211009 |
|---|---|
| Chromosome Location | chr6:12515967-12515968 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr6:12011882..12015415-chr6:12515436..12517509,3 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000095951 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:14)
| rs_ID | r2[population] |
|---|---|
| rs13199416 | 0.82[MEX][hapmap] |
| rs13214038 | 0.89[AMR][1000 genomes] |
| rs13214464 | 0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes] |
| rs13217076 | 0.89[EUR][1000 genomes] |
| rs1413513 | 0.85[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs1931548 | 0.85[CEU][hapmap];0.92[TSI][hapmap] |
| rs35802624 | 0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs4714632 | 0.85[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs7753779 | 0.83[CHB][hapmap];0.88[JPT][hapmap];0.81[ASN][1000 genomes] |
| rs7756687 | 0.89[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs9349245 | 0.84[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs9349250 | 0.91[MEX][hapmap] |
| rs9381221 | 0.83[ASN][1000 genomes] |
| rs9381224 | 0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
