Variant report

Variant	rs13217076
Chromosome Location	chr6:12505140-12505141
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs13211009	0.90[CEU][hapmap];0.81[MEX][hapmap];0.83[TSI][hapmap];0.89[EUR][1000 genomes]
rs13214464	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1413513	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1931548	1.00[CEU][hapmap];0.89[CHB][hapmap];0.87[CHD][hapmap];0.92[TSI][hapmap]
rs35802624	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4714632	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7753779	0.84[CHB][hapmap];0.83[GIH][hapmap];0.97[LWK][hapmap];0.82[MEX][hapmap]
rs9349245	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9349250	0.85[CEU][hapmap];0.81[MEX][hapmap]
rs9381187	0.89[LWK][hapmap]
rs9381224	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:12492000-12506000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:12502800-12505600	Weak transcription	Brain Germinal Matrix	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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