Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:12492195..12494327-chr6:12503414..12506228,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10807283	0.92[ASN][1000 genomes]
rs13211009	0.90[CEU][hapmap];0.83[CHB][hapmap];0.88[JPT][hapmap];0.84[TSI][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13214464	0.89[EUR][1000 genomes]
rs13217076	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1413513	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1931548	0.95[CEU][hapmap];0.92[TSI][hapmap]
rs1999622	0.92[ASN][1000 genomes]
rs2876273	0.92[ASN][1000 genomes]
rs35802624	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4714632	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7743158	0.92[ASN][1000 genomes]
rs7753779	1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.86[MEX][hapmap];0.94[ASN][1000 genomes]
rs9349245	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9349250	0.85[CEU][hapmap];0.81[LWK][hapmap];0.80[TSI][hapmap]
rs9369371	0.91[ASN][1000 genomes]
rs9381187	0.89[CHB][hapmap];0.85[CHD][hapmap];0.82[JPT][hapmap];0.92[LWK][hapmap]
rs9381221	0.87[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs9394922	0.82[GIH][hapmap]
rs9471883	0.91[ASN][1000 genomes]
rs9471890	0.92[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:12505400-12508200	Enhancers	Fetal Brain Male	brain
2	chr6:12505600-12506200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr6:12505600-12507200	Enhancers	NHEK	skin
4	chr6:12505600-12507400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:12505600-12507600	Enhancers	Colon Smooth Muscle	Colon
6	chr6:12505800-12506200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:12505800-12506200	Enhancers	Fetal Brain Female	brain
8	chr6:12505800-12506200	Enhancers	Stomach Smooth Muscle	stomach
9	chr6:12505800-12506200	Enhancers	A549	lung
10	chr6:12505800-12506600	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr6:12506000-12506400	Enhancers	Rectal Smooth Muscle	rectum
12	chr6:12506000-12506600	Enhancers	HMEC	breast
13	chr6:12506000-12506800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr6:12506000-12507200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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