Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:129199961..129203403-chr7:129205085..129209106,3	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10257409	0.84[ASN][1000 genomes]
rs1125056	0.86[ASN][1000 genomes]
rs11765308	0.88[ASN][1000 genomes]
rs11765389	0.88[ASN][1000 genomes]
rs11768713	0.88[ASN][1000 genomes]
rs13222287	0.81[EUR][1000 genomes]
rs13235012	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1665111	0.90[ASN][1000 genomes]
rs2121265	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2598178	0.91[ASN][1000 genomes]
rs2896417	0.84[ASN][1000 genomes]
rs34159564	0.81[EUR][1000 genomes]
rs34780485	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34947551	0.81[EUR][1000 genomes]
rs35366849	0.82[EUR][1000 genomes]
rs4554407	0.84[ASN][1000 genomes]
rs56052358	0.89[ASN][1000 genomes]
rs56178414	0.92[ASN][1000 genomes]
rs612972	0.87[ASN][1000 genomes]
rs659495	0.87[ASN][1000 genomes]
rs691089	0.82[ASN][1000 genomes]
rs6950910	0.81[EUR][1000 genomes]
rs875832	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831128	chr7:129063040-129240800	Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	esv3478069	chr7:129157163-129204221	Weak transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	esv3478070	chr7:129157177-129204220	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:129198600-129216800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:129200400-129202800	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr7:129200800-129203200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr7:129201600-129202400	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr7:129201600-129202400	Enhancers	Spleen	Spleen
6	chr7:129201600-129202800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:129202000-129202400	Enhancers	Monocytes-CD14+_RO01746	blood

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