The 2.0 version of rSNPBase

Variant report

Variant rs1328043
Chromosome Location chr13:79891901-79891902
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79865000-79893200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr13:79881800-79892800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr13:79882000-79894000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr13:79882200-79892800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr13:79882200-79893600 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr13:79882200-79894400 Weak transcription H1 Cell Line embryonic stem cell
7 chr13:79882200-79894400 Weak transcription Brain Angular Gyrus brain
8 chr13:79882200-79895600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr13:79882200-79899200 Weak transcription Fetal Muscle Trunk muscle
10 chr13:79882200-79907400 Weak transcription Fetal Muscle Leg muscle
11 chr13:79882200-79907600 Weak transcription Brain Anterior Caudate brain
12 chr13:79882200-79909800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr13:79882400-79892000 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr13:79882400-79892800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr13:79882400-79893200 Weak transcription HepG2 liver
16 chr13:79882400-79894400 Weak transcription Stomach Smooth Muscle stomach
17 chr13:79882400-79894400 Weak transcription Osteobl bone
18 chr13:79882400-79904400 Weak transcription Brain Cingulate Gyrus brain
19 chr13:79882400-79905000 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr13:79882400-79911200 Weak transcription Left Ventricle heart
21 chr13:79882400-79911200 Weak transcription Ovary ovary
22 chr13:79882400-79914400 Weak transcription Rectal Smooth Muscle rectum
23 chr13:79882400-79925000 Weak transcription HSMMtube muscle
24 chr13:79882600-79894400 Weak transcription Muscle Satellite Cultured Cells --
25 chr13:79884000-79899400 Weak transcription Psoas Muscle Psoas
26 chr13:79884000-79905200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr13:79884200-79892800 Weak transcription Primary hematopoietic stem cells blood
28 chr13:79884400-79909000 Weak transcription Brain Hippocampus Middle brain
29 chr13:79884800-79893600 Weak transcription NH-A brain
30 chr13:79884800-79895600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr13:79885000-79892200 Weak transcription Fetal Thymus thymus
32 chr13:79885400-79892000 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr13:79886400-79892800 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr13:79886400-79893000 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr13:79886400-79893200 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr13:79886400-79894200 Weak transcription Primary B cells from peripheral blood blood
37 chr13:79886400-79911200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr13:79886600-79892000 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr13:79886600-79900000 Weak transcription Fetal Kidney kidney
40 chr13:79886600-79950200 Weak transcription Fetal Brain Male brain
41 chr13:79886800-79893200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr13:79887000-79892800 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr13:79887000-79894600 Weak transcription Fetal Lung lung
44 chr13:79887000-79904600 Weak transcription Brain Substantia Nigra brain
45 chr13:79887000-79907800 Weak transcription Colon Smooth Muscle Colon
46 chr13:79887200-79946600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr13:79887400-79892000 Weak transcription HUVEC blood vessel
48 chr13:79887800-79907800 Weak transcription NHLF lung
49 chr13:79888000-79894400 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr13:79888000-79942800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015