Variant report
| Variant | rs13376339 |
|---|---|
| Chromosome Location | chr1:173695265-173695266 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:173684800-173702800 | Weak transcription | Spleen | Spleen |
| 2 | chr1:173685000-173720800 | Weak transcription | Small Intestine | intestine |
| 3 | chr1:173685200-173724600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 4 | chr1:173685400-173702800 | Weak transcription | Psoas Muscle | Psoas |
| 5 | chr1:173685400-173725000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 6 | chr1:173685600-173702800 | Weak transcription | Brain Substantia Nigra | brain |
| 7 | chr1:173685800-173702800 | Weak transcription | NH-A | brain |
| 8 | chr1:173685800-173703000 | Weak transcription | Osteobl | bone |
| 9 | chr1:173685800-173724800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 10 | chr1:173686200-173702800 | Weak transcription | NHEK | skin |
| 11 | chr1:173686600-173702800 | Weak transcription | HSMMtube | muscle |
| 12 | chr1:173686800-173702800 | Weak transcription | Gastric | stomach |
| 13 | chr1:173686800-173703000 | Weak transcription | Brain Angular Gyrus | brain |
| 14 | chr1:173686800-173721600 | Weak transcription | HUVEC | blood vessel |
| 15 | chr1:173686800-173721800 | Weak transcription | Colon Smooth Muscle | Colon |
| 16 | chr1:173686800-173725400 | Weak transcription | Right Ventricle | heart |
| 17 | chr1:173687000-173702800 | Weak transcription | HepG2 | liver |
| 18 | chr1:173687600-173706600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 19 | chr1:173687800-173702200 | Weak transcription | Lung | lung |
| 20 | chr1:173687800-173707200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 21 | chr1:173689800-173695800 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 22 | chr1:173689800-173695800 | ZNF genes & repeats | Brain Germinal Matrix | brain |
| 23 | chr1:173690600-173695600 | ZNF genes & repeats | Fetal Brain Female | brain |
| 24 | chr1:173690600-173696200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 25 | chr1:173690600-173696400 | Strong transcription | Liver | Liver |
| 26 | chr1:173691200-173710000 | Weak transcription | Hela-S3 | cervix |
| 27 | chr1:173692200-173695800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 28 | chr1:173692200-173696000 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 29 | chr1:173692200-173697000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
| 30 | chr1:173692600-173695800 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
| 31 | chr1:173692600-173696000 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 32 | chr1:173692800-173696600 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 33 | chr1:173693000-173702600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr1:173693200-173695400 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 35 | chr1:173693200-173695800 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 36 | chr1:173693400-173696200 | ZNF genes & repeats | Primary monocytes fromperipheralblood | blood |
| 37 | chr1:173693600-173696000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 38 | chr1:173693600-173696600 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 39 | chr1:173693800-173695400 | Strong transcription | Adipose Nuclei | Adipose |
| 40 | chr1:173693800-173695600 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
| 41 | chr1:173693800-173695600 | ZNF genes & repeats | Fetal Intestine Large | intestine |
| 42 | chr1:173693800-173695600 | ZNF genes & repeats | Dnd41 | blood |
| 43 | chr1:173693800-173695800 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 44 | chr1:173693800-173695800 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 45 | chr1:173693800-173695800 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 46 | chr1:173693800-173695800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 47 | chr1:173693800-173695800 | Strong transcription | Thymus | Thymus |
| 48 | chr1:173693800-173696000 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
| 49 | chr1:173693800-173696400 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
| 50 | chr1:173694000-173695600 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
