Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10184407	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10204324	0.85[ASN][1000 genomes]
rs10932423	0.87[ASN][1000 genomes]
rs11680307	0.95[ASN][1000 genomes]
rs11690618	0.86[ASN][1000 genomes]
rs12151841	0.88[ASN][1000 genomes]
rs12465933	0.86[ASN][1000 genomes]
rs12469791	0.86[ASN][1000 genomes]
rs12473715	0.90[ASN][1000 genomes]
rs1402768	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1464451	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1521655	0.92[ASN][1000 genomes]
rs1521656	0.90[ASN][1000 genomes]
rs1521658	0.88[ASN][1000 genomes]
rs1568520	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17344266	0.81[ASN][1000 genomes]
rs17344385	0.88[ASN][1000 genomes]
rs17416263	0.88[ASN][1000 genomes]
rs1829675	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4571009	0.85[ASN][1000 genomes]
rs56242159	0.94[ASN][1000 genomes]
rs56351822	0.94[ASN][1000 genomes]
rs62184038	0.83[ASN][1000 genomes]
rs62184046	0.94[ASN][1000 genomes]
rs6435689	0.81[EUR][1000 genomes]
rs6715314	0.94[ASN][1000 genomes]
rs6738304	0.88[ASN][1000 genomes]
rs7426206	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7562352	0.88[ASN][1000 genomes]
rs7577530	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7579502	0.82[ASN][1000 genomes]
rs7579631	0.88[ASN][1000 genomes]
rs9678442	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011572	chr2:212840066-213152279	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv875802	chr2:212867291-213004603	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv875805	chr2:212891401-213164837	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv875806	chr2:212997024-213211067	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212997000-212997800	Enhancers	Fetal Brain Male	brain

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